RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PPP4R1LQ9P1A2 415 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 MYOTQ9UBF9 498 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ST6GALNAC2Q9UJ37 374 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZNF346Q9UL40 294 aaKnown RBP10.2□□□□□ -0.78
LIG3-204ENST00000585740 ZMIZ1Q9ULJ6 1067 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 FKBP7Q9Y680 259 aa10.2□□□□□ -0.78
LIG3-204ENST00000585740 ANKRD33BA6NCL7 494 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 A6NIZ1 184 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 NPIPB13A6NJU9 1138 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 TMEM200CA6NKL6 621 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 NPIPB4C9JG80 1138 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 MAGEB3O15480 346 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SLC19A2O60779 497 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 ARL6IP5O75915 188 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 F13BP05160 661 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 PRKCAP17252 672 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 FKBP2P26885 142 aaKnown RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 GTF2E2P29084 291 aaKnown RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 GRPRP30550 384 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 MPLP40238 635 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 GDI2P50395 445 aaKnown RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 ZNF41P51814 821 aaPredicted RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 RAP1BP61224 184 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 RPL27P61353 136 aaKnown RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 RAP1AP62834 184 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SIRPAP78324 504 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SLC3A1Q07837 685 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SNTA1Q13424 505 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 PCOLCEQ15113 449 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 MESTQ5EB52 335 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SLC25A53Q5H9E4 307 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 EEF1A1P5Q5VTE0 462 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 FAM205BPQ63HN1 556 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 STEAP3Q658P3 488 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 LCN10Q6JVE6 187 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 POMZP3Q6PJE2 187 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 FAM198BQ6UWH4 519 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 LYPD8Q6UX82 237 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 PRR23CQ6ZRP0 262 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 FAM220AQ7Z4H9 259 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SLC22A16Q86VW1 577 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 GDPD1Q8N9F7 314 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 POC5Q8NA72 575 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 MFSD8Q8NHS3 518 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 ELP5Q8TE02 316 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 ZNF524Q96C55 264 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SLC25A36Q96CQ1 311 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SPACA9Q96E40 222 aaPredicted RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 MRGPRX4Q96LA9 322 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 KLHL15Q96M94 604 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 CMKLR1Q99788 373 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 ZPBPQ9BS86 351 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 STRADBQ9C0K7 418 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 METTL7AQ9H8H3 244 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 RPRD1BQ9NQG5 326 aaKnown RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 SERINC1Q9NRX5 453 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 TAS2R5Q9NYW4 299 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 GNG8Q9UK08 70 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 WIF1Q9Y5W5 379 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 SIRT4Q9Y6E7 314 aaPredicted RBP10.19□□□□□ -0.78
LIG3-204ENST00000585740 FAM208BQ5VWN6 2430 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 CPAMD8Q8IZJ3 1885 aa10.19□□□□□ -0.78
LIG3-204ENST00000585740 ARPC4-TTLL3A0A0A6YYG9 625 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 TRAV1-2A0A0B4J238 106 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 A0A1W2PRG6 482 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 FUOMA2VDF0 154 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 FABP12A6NFH5 140 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 ANKRD61A6NGH8 418 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 AGRPO00253 132 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 PLPP3O14495 311 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 ARHGEF9O43307 516 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 GMFGO60234 142 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 SELENOFO60613 162 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 TMEM127O75204 238 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 SERPINI2O75830 405 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 SC5DO75845 299 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 EDNRAP25101 427 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 ACVR1BP36896 505 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 FOXL2P58012 376 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 TP53I3Q53FA7 332 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 FAM69BQ5VUD6 431 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 AGAP7PQ5VUJ5 663 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 HBMQ6B0K9 141 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 TMEM81Q6P7N7 255 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 OPN5Q6U736 354 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 FAM131AQ6UXB0 335 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 SSX6Q7RTT6 188 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 CEACAM19Q7Z692 300 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 PXKQ7Z7A4 578 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 LAX1Q8IWV1 398 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 OR51L1Q8NGJ5 315 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 OR2Y1Q8NGV0 311 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 ZPLD1Q8TCW7 415 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 RPS4Y2Q8TD47 263 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 RHBDD1Q8TEB9 315 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 THAP3Q8WTV1 239 aaPredicted RBP10.18□□□□□ -0.78
LIG3-204ENST00000585740 C8orf44Q96CB5 159 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 RNF31Q96EP0 1072 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 PELI1Q96FA3 418 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 DIRAS2Q96HU8 199 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms