RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 UQCC3Q6UW78 93 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 C6orf89Q6UWU4 347 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 KDM7AQ6ZMT4 941 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 ZNF620Q6ZNG0 422 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 CCDC73Q6ZRK6 1079 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 RFLNAQ6ZTI6 216 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 H2AFVQ71UI9 128 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 DCAF4L2Q8NA75 395 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 SUMF2Q8NBJ7 301 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 OR4F6Q8NGB9 312 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 OR1L6Q8NGR2 347 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 GPR151Q8TDV0 419 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 PIBF1Q8WXW3 757 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 ARPC1AQ92747 370 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 CNDP1Q96KN2 507 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 C12orf42Q96LP6 360 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 OR8B4Q96RC9 309 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 RASL11BQ9BPW5 248 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 ECSITQ9BQ95 431 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 FAIM2Q9BWQ8 316 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 CDHR2Q9BYE9 1310 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 DEFB127Q9H1M4 99 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 SRMSQ9H3Y6 488 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 RNF167Q9H6Y7 350 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 PSMC3IPQ9P2W1 217 aaPredicted RBP2.55□□□□□ -2
SMCHD1-209ENST00000583441 MMP17Q9ULZ9 603 aa2.55□□□□□ -2
SMCHD1-209ENST00000583441 THSD7BQ9C0I4 1608 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 GOLGA8OA6NCC3 632 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 RBMY1BA6NDE4 496 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 RBMY1EA6NEQ0 496 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 GOLGA8NF8WBI6 632 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 KRTAP4-16G5E9R7 235 aaPredicted RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 CCL21O00585 134 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 DLGAP1O14490 977 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 INSP01308 110 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 GAPDHP04406 335 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 IGHV4-34P06331 123 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 RBMY1DP0C7P1 496 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 RBMY1A1P0DJD3 496 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 KITLGP21583 273 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 DRD3P35462 400 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 SLC26A3P40879 764 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 TFPI2P48307 235 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 FBXW4P57775 412 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 ACVR1Q04771 509 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 DAZ2Q13117 558 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 TGFBIQ15582 683 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 C2orf83Q53S99 150 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 LRRC10Q5BKY1 277 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 PAGE3Q5JUK9 113 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 RNASEKQ6P5S7 137 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 CAMK2N1Q7Z7J9 78 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 TMEM135Q86UB9 458 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 PIANPQ8IYJ0 282 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 OR6X1Q8NH79 312 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 BLOC1S5Q8TDH9 187 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 NUP58Q9BVL2 599 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 ZFP14Q9HCL3 533 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 ADAP2Q9NPF8 381 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 DAZ3Q9NR90 486 aaKnown RBP2.54□□□□□ -2
SMCHD1-209ENST00000583441 DCAF16Q9NXF7 216 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 CALYQ9NYX4 217 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 NYAP2Q9P242 653 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 RPS6KB2Q9UBS0 482 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 SLC7A8Q9UHI5 535 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 GNPTGQ9UJJ9 305 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 ZNF225Q9UK10 706 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 NUP50Q9UKX7 468 aa2.54□□□□□ -2
SMCHD1-209ENST00000583441 A0A0B4J2A0 478 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 A0A0G2JN53 185 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 CTAGE15A4D2H0 777 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 PINLYPA6NC86 204 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 CST1P01037 141 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 IGHV2-5P01817 119 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 KRT14P02533 472 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 SERPIND1P05546 499 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 GIPP09681 153 aaPredicted RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 UBTFL1P0CB47 393 aaPredicted RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 NR2C1P13056 603 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 TDGF1P13385 188 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 CRISP2P16562 243 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 CHMLP26374 656 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 GDI1P31150 447 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 RORAP35398 523 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 ATP5C1P36542 298 aaKnown RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 GPR6P46095 362 aaPredicted RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 TDGF1P3P51864 188 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 SUB1P53999 127 aaKnown RBP eCLIP2.53□□□□□ -2
SMCHD1-209ENST00000583441 MRPS22P82650 360 aaKnown RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 PPIL2Q13356 520 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 KIAA0087Q14695 138 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 MPPED2Q15777 294 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 ZNF630Q2M218 657 aaPredicted RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 VPS26BQ4G0F5 336 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 COA6Q5JTJ3 125 aaKnown RBP2.53□□□□□ -2
SMCHD1-209ENST00000583441 ARMC12Q5T9G4 340 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 CTRB2Q6GPI1 263 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 C1orf94Q6P1W5 598 aa2.53□□□□□ -2
SMCHD1-209ENST00000583441 METAP1DQ6UB28 335 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms