RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 BDH2Q9BUT1 245 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 ZNF426Q9BUY5 554 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 TRAF4Q9BUZ4 470 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-220ENST00000581707 EMC6Q9BV81 110 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 SLC19A3Q9BZV2 496 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 GSX1Q9H4S2 264 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-220ENST00000581707 FKRPQ9H9S5 495 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 CRLF2Q9HC73 371 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 NANSQ9NR45 359 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 ARPC4-TTLL3A0A0A6YYG9 625 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 SLC35F4A4IF30 521 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 ZNF726A6NNF4 738 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 KPNA4O00629 521 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-220ENST00000581707 ADORA3P0DMS8 318 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 HOXB1P14653 301 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-220ENST00000581707 PAX7P23759 505 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 OR1E2P47887 323 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 TAS2R41P59536 307 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 CEACAM16Q2WEN9 425 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 AGAP6Q5VW22 663 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 CARD17Q5XLA6 110 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 DEF8Q6ZN54 512 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 BIVMQ86UB2 503 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 C20orf196Q8IYI0 205 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 ZNF837Q96EG3 531 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-220ENST00000581707 LRR1Q96L50 414 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 DHRS9Q9BPW9 319 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 HOPXQ9BPY8 73 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-220ENST00000581707 GRIP2Q9C0E4 1043 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 POLR2J2Q9GZM3 115 aaKnown RBP17.03■□□□□ 0.32
SREBF1-220ENST00000581707 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 POLR2J3Q9H1A7 115 aaKnown RBP17.03■□□□□ 0.32
SREBF1-220ENST00000581707 MED29Q9NX70 200 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 RIMS3Q9UJD0 308 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 ATP23Q9Y6H3 246 aa17.03■□□□□ 0.32
SREBF1-220ENST00000581707 C11orf98E9PRG8 122 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 H7C1Q1 480 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 M0R3G1 203 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 SERPINI2O75830 405 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 HIST1H2ABP04908 130 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 TTKP33981 857 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 CDKN1AP38936 164 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 LIPEQ05469 1076 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 PIN1Q13526 163 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-220ENST00000581707 PHYHD1Q5SRE7 291 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 B3GLCTQ6Y288 498 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 HIST3H2AQ7L7L0 130 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 CIARTQ8N365 385 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-220ENST00000581707 LRRC17Q8N6Y2 441 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 HIST1H2ACQ93077 130 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 TPD52L3Q96J77 140 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 NELFAQ9H3P2 528 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 TAS2R5Q9NYW4 299 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 GMPR2Q9P2T1 348 aaKnown RBP17.02■□□□□ 0.32
SREBF1-220ENST00000581707 ZNF229Q9UJW7 825 aa17.02■□□□□ 0.32
SREBF1-220ENST00000581707 IGHV1-18A0A0C4DH31 117 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 TRIM64A6NGJ6 449 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 TRIM64BA6NI03 449 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 OR5F1O95221 314 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 RBM34P42696 430 aaKnown RBP17.01■□□□□ 0.31
SREBF1-220ENST00000581707 FABP6P51161 128 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 SLC7A2P52569 658 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 SELENOWP63302 87 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 TUBA1BP68363 451 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 TUBA4AP68366 448 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 ZP4Q12836 540 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 CAMK2DQ13557 499 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 C8orf82Q6P1X6 216 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-220ENST00000581707 TUBA1AQ71U36 451 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 NKAIN4Q8IVV8 208 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 FBXL14Q8N1E6 418 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 CMTM5Q96DZ9 223 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 SLC38A2Q96QD8 506 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 SMR3AQ99954 134 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 NSRP1Q9H0G5 558 aaKnown RBP17.01■□□□□ 0.31
SREBF1-220ENST00000581707 MYLK2Q9H1R3 596 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 MOV10Q9HCE1 1003 aaKnown RBP17.01■□□□□ 0.31
SREBF1-220ENST00000581707 B3GAT2Q9NPZ5 323 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 MEPEQ9NQ76 525 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-220ENST00000581707 MOKQ9UQ07 419 aa17.01■□□□□ 0.31
SREBF1-220ENST00000581707 ZNF99A8MXY4 864 aaPredicted RBP17■□□□□ 0.31
SREBF1-220ENST00000581707 ATP6V1G2-DDX39BF2Z307 99 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 NME4O00746 187 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 GSTA4O15217 222 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 RNF13O43567 381 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 MT-ND1P03886 318 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 ASAH2BP0C7U1 165 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 UMPSP11172 480 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 IFNGR1P15260 489 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 DRD4P21917 467 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 LSP1P33241 339 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 NUDT2P50583 147 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 ZNF544Q6NX49 715 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 HACD2Q6Y1H2 254 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 CPLX4Q7Z7G2 160 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 WDFY1Q8IWB7 410 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 MUC15Q8N387 334 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 OR6N1Q8NGY5 312 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 LZICQ8WZA0 190 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 COX4I2Q96KJ9 171 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms