RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ULBP2Q9BZM5 246 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 GBA3Q9H227 469 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 COQ10BQ9H8M1 238 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 RAB18Q9NP72 206 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 GIN1Q9NXP7 522 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 CALYQ9NYX4 217 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 SPATA7Q9P0W8 599 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 XCL2Q9UBD3 114 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 GGA2Q9UJY4 613 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 MN1Q10571 1320 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 ITGB4P16144 1822 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 IGHV5-51A0A0C4DH38 117 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 IGHV3-66A0A0C4DH42 116 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 CIB4A0PJX0 185 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 A8MXQ7 604 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 INS-IGF2F8WCM5 200 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 XKRYO14609 159 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 DIRAS1O95057 198 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 EPB41P11171 864 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 CCDC130P13994 396 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 LAP3P28838 519 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 IL12AP29459 219 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 QARSP47897 775 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 NCBP2P52298 156 aaKnown RBP eCLIP1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 PLD1Q13393 1074 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 TTLL9Q3SXZ7 439 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 COX19Q49B96 90 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 DMRTC1Q5HYR2 192 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 VAX1Q5SQQ9 334 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 FBXW9Q5XUX1 488 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 NEGR1Q7Z3B1 354 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 MMAAQ8IVH4 418 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 UBALD2Q8IYN6 164 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 ZADH2Q8N4Q0 377 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 C15orf56Q8N910 161 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 FNDC5Q8NAU1 212 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 SYT14Q8NB59 555 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 SMARCD2Q92925 531 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 PDXPQ96GD0 296 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 OR10C1Q96KK4 312 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 TGM7Q96PF1 710 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 CD84Q9UIB8 345 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 TMCO1Q9UM00 188 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 RPH3ALQ9UNE2 315 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 TIMM10BQ9Y5J6 103 aa1.59□□□□□ -2.15
SMCHD1-206ENST00000581631 A0A1B0GVX0 72 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 SRP72O76094 671 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 VAMP5O95183 116 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 IGKV4-1P06312 121 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 RNASE2P10153 161 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 PRPS2P11908 318 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 PSMC3P17980 439 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 TCN2P20062 427 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 ATP6V1C1P21283 382 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 DRD5P21918 477 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 MDH1P40925 334 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 RGS4P49798 205 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 MESDQ14696 234 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 SF3A2Q15428 464 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 PRSS8Q16651 343 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 C1orf220Q5T0J3 134 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 PRR9Q5T870 116 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 CNIH2Q6PI25 160 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 LINC00173Q6ZV60 143 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 NCCRP1Q6ZVX7 275 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 TRIM69Q86WT6 500 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 TMEM123Q8N131 208 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 VN1R2Q8NFZ6 395 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 RBMXL1Q96E39 390 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 CLCC1Q96S66 551 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 THUMPD2Q9BTF0 503 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 SPNS1Q9H2V7 528 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 NHEJ1Q9H9Q4 299 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 ZNF355PQ9NSJ1 428 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 LAMP5Q9UJQ1 280 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 AURKCQ9UQB9 309 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 FANCIQ9NVI1 1328 aa1.58□□□□□ -2.16
SMCHD1-206ENST00000581631 ZNF233A6NK53 670 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 RPL36A-HNRNPH2H7BZ11 118 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 HSD17B6O14756 317 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 POLR2DO15514 142 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 MED7O43513 233 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 MPZL1O95297 269 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 UBTFL1P0CB47 393 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 GNA11P29992 359 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 SOX6P35712 828 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 RPL13AP40429 203 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 RAP1AP62834 184 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 SLC7A9P82251 487 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 SYCNQ0VAF6 134 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 OR5I1Q13606 314 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 TPD52L1Q16890 204 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 DNLZQ5SXM8 178 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 H2AFVQ71UI9 128 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 PLA2G4DQ86XP0 818 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 RIMKLAQ8IXN7 391 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 ESR2Q92731 530 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 UBE2E3Q969T4 207 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 WFIKKN1Q96NZ8 548 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms