RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 SGTBQ96EQ0 304 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 PIK3IP1Q96FE7 263 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 PLPPR2Q96GM1 343 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ZC3HAV1LQ96H79 300 aaKnown RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 TXNDC15Q96J42 360 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ADAD1Q96M93 576 aaKnown RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 PIP5K1AQ99755 562 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 FNDC11Q9BVV2 318 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 NMNAT1Q9HAN9 279 aaPredicted RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 OBP2BQ9NPH6 170 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 C20orf141Q9NUB4 165 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 PRPF19Q9UMS4 504 aaKnown RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 ANKRD17O75179 2603 aaKnown RBP11.08□□□□□ -0.64
SNORD55-201ENST00000581525 VPS13CQ709C8 3753 aa11.08□□□□□ -0.64
SNORD55-201ENST00000581525 CELSR1Q9NYQ6 3014 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 ARPC4-TTLL3A0A0A6YYG9 625 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 CIB4A0PJX0 185 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 SLC35F4A4IF30 521 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF587BE7ETH6 402 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 ARPC2O15144 300 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 AKAP8O43823 692 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 TMCC2O75069 709 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 GMNNO75496 209 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 ATE1O95260 518 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 NQO1P15559 274 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 CD53P19397 219 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 MSX2P35548 267 aaPredicted RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 IST1P53990 364 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 LSM11P83369 360 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 VLDLRP98155 873 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 POU3F1Q03052 451 aaPredicted RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 HIST3H3Q16695 136 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 MTX3Q5HYI7 312 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 SPNS3Q6ZMD2 512 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 MBOAT2Q6ZWT7 520 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 PIWIL3Q7Z3Z3 882 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 OR1K1Q8NGR3 316 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 SLC7A13Q8TCU3 470 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 NRGNQ92686 78 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 POP5Q969H6 163 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 BPIFA2Q96DR5 249 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 NSMCE2Q96MF7 247 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 FOXC2Q99958 501 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 NELFAQ9H3P2 528 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 ESRP2Q9H6T0 727 aaKnown RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 GPR35Q9HC97 309 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 IL1RAPQ9NPH3 570 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 NPAP1Q9NZP6 1156 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 CRNNQ9UBG3 495 aaPredicted RBP11.07□□□□□ -0.64
SNORD55-201ENST00000581525 HIF3AQ9Y2N7 669 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 MYO9AB2RTY4 2548 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 CCDC168Q8NDH2 2452 aa11.07□□□□□ -0.64
SNORD55-201ENST00000581525 RAD51DO75771 328 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 RAF1P04049 648 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 HIST1H2ABP04908 130 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 ITGA2P17301 1181 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 TCN1P20061 433 aaPredicted RBP11.06□□□□□ -0.64
SNORD55-201ENST00000581525 PTNP21246 168 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 SLC9A3P48764 834 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 HMGA2P52926 109 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 ROR2Q01974 943 aaKnown RBP11.06□□□□□ -0.64
SNORD55-201ENST00000581525 LGALS3BPQ08380 585 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 ACKR1Q16570 336 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 LCN8Q6JVE9 175 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 ANKRD16Q6P6B7 361 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 PGM2L1Q6PCE3 622 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 SLC35D2Q76EJ3 337 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 HIST3H2AQ7L7L0 130 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 CYP4Z1Q86W10 505 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 WFDC8Q8IUA0 241 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 CCDC36Q8IYA8 594 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 C10orf53Q8N6V4 93 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 LRRC75AQ8NAA5 344 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 HIST1H2ACQ93077 130 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF837Q96EG3 531 aaPredicted RBP11.06□□□□□ -0.64
SNORD55-201ENST00000581525 SLC25A44Q96H78 314 aaPredicted RBP11.06□□□□□ -0.64
SNORD55-201ENST00000581525 MED29Q9NX70 200 aa11.06□□□□□ -0.64
SNORD55-201ENST00000581525 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 MAP1AP78559 2803 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 TCRBV5S2A0A599 114 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF99A8MXY4 864 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 KPNA4O00629 521 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 RNF13O43567 381 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 PTP4A3O75365 173 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 OR6A2O95222 327 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 PLAUP00749 431 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 IGHMP01871 453 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 IFNGR1P15260 489 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 PAX1P15863 534 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 MAKP20794 623 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 AHCYP23526 432 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 PTAFRP25105 342 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms