RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ZNF511Q8NB15 262 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR6S1Q8NH40 331 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR10D3Q8NH80 312 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR2V1Q8NHB1 315 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TRUB1Q8WWH5 349 aaKnown RBP5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ASB10Q8WXI3 467 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HAS2Q92819 552 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 EXTL1Q92935 676 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MIB2Q96AX9 1013 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF385AQ96PM9 386 aaKnown RBP5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PIGQQ9BRB3 760 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF649Q9BS31 505 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RNF32Q9H0A6 362 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RBM38Q9H0Z9 239 aaKnown RBP5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SYT4Q9H2B2 425 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SRA1Q9HD15 236 aaKnown RBP5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ACOT13Q9NPJ3 140 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 KLHL21Q9UJP4 597 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 BLOC1S6Q9UL45 172 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 COPS3Q9UNS2 423 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SSUH2Q9Y2M2 353 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 KLF13Q9Y2Y9 288 aaPredicted RBP5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LSM2Q9Y333 95 aaKnown RBP5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SNX5Q9Y5X3 404 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CEPT1Q9Y6K0 416 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 FAM186AA6NE01 2351 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PCNX2A6NKB5 2137 aa5.5□□□□□ -1.53
RNU4ATAC-201ENST00000580972 WDR87Q6ZQQ6 2873 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 IGLV1-36A0A0B4J1U3 117 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PNMA8CA0A1B0GUJ8 204 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 A0A1W2PNV4 684 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SLC22A23A1A5C7 686 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 AQP7P3A6NL99 342 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF99A8MXY4 864 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NPIPA5E9PKD4 350 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 J3QRE1 110 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR2T1O43869 369 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TRMUO75648 421 aaKnown RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR6A2O95222 327 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MPZL1O95297 269 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RAB36O95755 333 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LALBAP00709 142 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 IGHMP01871 453 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HPNP05981 417 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LIMS3P0CW19 117 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LIMS4P0CW20 117 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PIPP12273 146 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 JUNBP17275 347 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SDHBP21912 280 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ADH6P28332 368 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GTF2E2P29084 291 aaKnown RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NTF4P34130 210 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TGFBR1P36897 503 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TGFBR2P37173 567 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LIPAP38571 399 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 EIF1AXP47813 144 aaKnown RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MTNR1AP48039 350 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CENPAP49450 140 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NR1H2P55055 460 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 BIDP55957 195 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CLDN18P56856 261 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RPL27P61353 136 aaKnown RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RAC1P63000 192 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF85Q03923 595 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZP4Q12836 540 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CAMK2DQ13557 499 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CRTC2Q53ET0 693 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SOWAHCQ53LP3 525 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PHYHD1Q5SRE7 291 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 EEF1A1P5Q5VTE0 462 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GPR107Q5VW38 600 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NXNL2Q5VZ03 156 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 HBMQ6B0K9 141 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LRRC69Q6ZNQ3 347 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SLC35D2Q76EJ3 337 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 GPAT4Q86UL3 456 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 LHFPL3Q86UP9 236 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 CLVS1Q8IUQ0 354 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR6V1Q8N148 313 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ARIH2OSQ8N7S6 290 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZIC4Q8N9L1 334 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 ZFP62Q8NB50 900 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR10H4Q8NGA5 316 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR13F1Q8NGS4 319 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OR6K6Q8NGW6 343 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SLC25A43Q8WUT9 341 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 IPCEF1Q8WWN9 437 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 NSMAFQ92636 917 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 RPL3LQ92901 407 aaKnown RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 MYDGFQ969H8 173 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TMEM80Q96HE8 168 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 Q96MT0 163 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 OPALINQ96PE5 141 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TAAR6Q96RI8 345 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TEAD3Q99594 435 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TIMP4Q99727 224 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 TUBA1CQ9BQE3 449 aa5.49□□□□□ -1.53
RNU4ATAC-201ENST00000580972 PRRG3Q9BZD7 231 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms