RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PGGHGQ32M88 737 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 C3orf36Q3SXR2 165 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
SS18-212ENST00000579061 HIKESHIQ53FT3 197 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 SLC22A25Q6T423 547 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 DEF8Q6ZN54 512 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 CPLX4Q7Z7G2 160 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 DTX2Q86UW9 622 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 CCDC36Q8IYA8 594 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 FAM169BQ8N8A8 192 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 HS6ST2Q96MM7 605 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 RIMS3Q9UJD0 308 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 ZNF229Q9UJW7 825 aa12.98□□□□□ -0.33
SS18-212ENST00000579061 SLC35F4A4IF30 521 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 NME4O00746 187 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 OR6A2O95222 327 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 ASAH2BP0C7U1 165 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 TNFRSF1BP20333 461 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 AHCYP23526 432 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 SLC7A2P52569 658 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 UBE2NP61088 152 aaKnown RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 CEACAM16Q2WEN9 425 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 AGAP6Q5VW22 663 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 YTHDF3Q7Z739 585 aaKnown RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 TRMT61AQ96FX7 289 aaKnown RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 ADAD1Q96M93 576 aaKnown RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 DHRS9Q9BPW9 319 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 TRAF4Q9BUZ4 470 aaPredicted RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 C1QTNF6Q9BXI9 259 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 NELFAQ9H3P2 528 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 ALG2Q9H553 416 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 B3GAT2Q9NPZ5 323 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 MEPEQ9NQ76 525 aaPredicted RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 MED29Q9NX70 200 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 CRNNQ9UBG3 495 aaPredicted RBP12.97□□□□□ -0.33
SS18-212ENST00000579061 ABCD2Q9UBJ2 740 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 POU2F3Q9UKI9 436 aa12.97□□□□□ -0.33
SS18-212ENST00000579061 C2CD3Q4AC94 2353 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 HTR3EA5X5Y0 456 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 ZNF726A6NNF4 738 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 ZNF99A8MXY4 864 aaPredicted RBP12.96□□□□□ -0.33
SS18-212ENST00000579061 E7EQL1 145 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 CXCR6O00574 342 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 CD8AP01732 235 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 MT-ND1P03886 318 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 HIST1H2ABP04908 130 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 IFNA8P32881 189 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 OR1E2P47887 323 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 GSK3BP49841 420 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 NUDT2P50583 147 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 ATP5J2P56134 94 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 ARF1P84077 181 aaKnown RBP12.96□□□□□ -0.33
SS18-212ENST00000579061 ST3GAL3Q11203 375 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 PIN1Q13526 163 aaPredicted RBP12.96□□□□□ -0.33
SS18-212ENST00000579061 ETFDHQ16134 617 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 HIST3H2AQ7L7L0 130 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 NKAIN4Q8IVV8 208 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 TMEM239Q8WW34 195 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 LIPHQ8WWY8 451 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 HIST1H2ACQ93077 130 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 TXNDC15Q96J42 360 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 TPD52L3Q96J77 140 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 C18orf12Q96KH6 178 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 SLC38A2Q96QD8 506 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 BDH2Q9BUT1 245 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 EMC6Q9BV81 110 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 FAM107BQ9H098 131 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 CRLF2Q9HC73 371 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
SS18-212ENST00000579061 C11orf98E9PRG8 122 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 KPNA4O00629 521 aaPredicted RBP12.95□□□□□ -0.34
SS18-212ENST00000579061 GSTA4O15217 222 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 OR7A10O76100 309 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 UMPSP11172 480 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 TTKP33981 857 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 UGT2B15P54855 530 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 PSME3P61289 254 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 GNGT1P63211 74 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 SPOCK1Q08629 439 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 CBLL1Q75N03 491 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 SLC35D2Q76EJ3 337 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 OR6X1Q8NH79 312 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 GTPBP3Q969Y2 492 aaKnown RBP12.95□□□□□ -0.34
SS18-212ENST00000579061 ZNF837Q96EG3 531 aaPredicted RBP12.95□□□□□ -0.34
SS18-212ENST00000579061 Q96MF0 132 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
SS18-212ENST00000579061 MED31Q9Y3C7 131 aa12.95□□□□□ -0.34
SS18-212ENST00000579061 SETD2Q9BYW2 2564 aaPredicted RBP12.94□□□□□ -0.34
SS18-212ENST00000579061 A0A096LPE4 126 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 IGHV1-18A0A0C4DH31 117 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 A0A1W2PPZ6 126 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 M0R3G1 203 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 RNF13O43567 381 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms