RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 OR4C3Q8NH37 302 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 OSTF1Q92882 214 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 DAZLQ92904 295 aaKnown RBP12.59□□□□□ -0.39
RNF43-202ENST00000577625 ADIPOR1Q96A54 375 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 ART5Q96L15 291 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 TRIM2Q9C040 744 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 FRG2CA6NGY1 282 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 TLX2O43763 284 aaPredicted RBP12.59□□□□□ -0.39
RNF43-202ENST00000577625 HPGDSO60760 199 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 HBQ1P09105 142 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 CXCL3P19876 107 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 PTNP21246 168 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 CRYZQ08257 329 aaKnown RBP12.59□□□□□ -0.39
RNF43-202ENST00000577625 EBPQ15125 230 aaKnown RBP12.59□□□□□ -0.39
RNF43-202ENST00000577625 C3P1Q6ZMU1 363 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 CCDC36Q8IYA8 594 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 NANOGP1Q8N7R0 232 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 BVESQ8NE79 360 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 DLL4Q9NR61 685 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 FLRT3Q9NZU0 649 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
RNF43-202ENST00000577625 RPL36Q9Y3U8 105 aaKnown RBP12.59□□□□□ -0.39
RNF43-202ENST00000577625 PCDHGA9Q9Y5G4 932 aaKnown RBP12.59□□□□□ -0.39
RNF43-202ENST00000577625 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 SERINC4A6NH21 518 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 LINC00587B1AMM8 73 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 H7C2Y5 167 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 AIPO00170 330 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 CDC42EP2O14613 210 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 SSX5O60225 188 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 GDF9O60383 454 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 SELENOFO60613 162 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 IL33O95760 270 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 ONECUT2O95948 504 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 GRK6P43250 576 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 SYT14P1Q58G82 188 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 HSD17B13Q7Z5P4 300 aaPredicted RBP12.58□□□□□ -0.4
RNF43-202ENST00000577625 STPG2Q8N412 459 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 LCORQ96JN0 433 aaPredicted RBP12.58□□□□□ -0.4
RNF43-202ENST00000577625 HS6ST2Q96MM7 605 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 TSSK6Q9BXA6 273 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 NDRG3Q9UGV2 375 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 PPIEQ9UNP9 301 aaKnown RBP12.58□□□□□ -0.4
RNF43-202ENST00000577625 TMEM5Q9Y2B1 443 aa12.58□□□□□ -0.4
RNF43-202ENST00000577625 EFCAB7A8K855 629 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 HRGP04196 525 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 CPEP16870 476 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 DCAF7P61962 342 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 DCDP81605 110 aaKnown RBP12.57□□□□□ -0.4
RNF43-202ENST00000577625 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
RNF43-202ENST00000577625 OPCMLQ14982 345 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 NDUFAF6Q330K2 333 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 KLHL26Q53HC5 615 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 EIF4E3Q8N5X7 224 aaKnown RBP12.57□□□□□ -0.4
RNF43-202ENST00000577625 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 PFN4Q8NHR9 129 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 LOXL4Q96JB6 756 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 LRR1Q96L50 414 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 CXorf58Q96LI9 332 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 GAL3ST4Q96RP7 486 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 ZNF426Q9BUY5 554 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 HDHD2Q9H0R4 259 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 C20orf141Q9NUB4 165 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 ZNF318Q5VUA4 2279 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 TRAV20A0A0B4J274 112 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 LNP1A1A4G5 178 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 IDSB3KWA1 339 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 GPR171O14626 319 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 PDCD5O14737 125 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 CSTAP01040 98 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 NMBP08949 121 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 H2AFB2P0C5Z0 115 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 SULT1A3P0DMM9 295 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 SULT1A4P0DMN0 295 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 FGF5P12034 268 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 LCN1P31025 176 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 ADH7P40394 386 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 RBM34P42696 430 aaKnown RBP12.57□□□□□ -0.4
RNF43-202ENST00000577625 CTBP2P56545 445 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 TRA2AQ13595 282 aaKnown RBP eCLIP12.57□□□□□ -0.43e-8■■□□□ 14.5
RNF43-202ENST00000577625 CLEC12AQ5QGZ9 265 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 MZT2AQ6P582 158 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 TMPRSS11FQ6ZWK6 438 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 FTMTQ8N4E7 242 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 OR1N1Q8NGS0 311 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 OR4Q3Q8NH05 313 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 BRIX1Q8TDN6 353 aaKnown RBP12.57□□□□□ -0.4
RNF43-202ENST00000577625 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 MESP1Q9BRJ9 268 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 TEX12Q9BXU0 123 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 DPH1Q9BZG8 443 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 NRSN2Q9GZP1 204 aa12.57□□□□□ -0.4
RNF43-202ENST00000577625 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
RNF43-202ENST00000577625 UBQLN4Q9NRR5 601 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms