RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 IGHV2-5P01817 119 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PIGRP01833 764 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SERPINA5P05154 406 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 DCNP07585 359 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 KRT16P08779 473 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 RBMY1CP0DJD4 496 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 LAMP1P11279 417 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CCL2P13500 99 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 MGMTP16455 207 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 TBPP20226 339 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 GABRR2P28476 465 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SHMT2P34897 504 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 GCKP35557 465 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CFHR2P36980 270 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 KIR2DS2P43631 304 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 GPR1P46091 355 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 RGRP47804 291 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NPBWR2P48146 333 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SSR4P51571 173 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PRELPP51888 382 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 UBE2MP61081 183 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 TPM4P67936 248 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ADARB1P78563 741 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 RPL36AP83881 106 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 ZNF33AQ06730 810 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ECH1Q13011 328 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 COTL1Q14019 142 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CYLC2Q14093 348 aaPredicted RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 LY6DQ14210 128 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NCF4Q15080 339 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 VAMP3Q15836 100 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NSUN5P1Q3KNT7 163 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PARP15Q460N3 678 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ZFP69Q49AA0 526 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ZNF506Q5JVG8 444 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 FAM182AQ5T1J6 154 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 GPRC6AQ5T6X5 926 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 OR5M10Q6IEU7 315 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ANKRD26P1Q6NSI1 321 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 UFSP1Q6NVU6 142 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 TRIM40Q6P9F5 258 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ASCL4Q6XD76 172 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 Q6ZN92 141 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NDUFAF7Q7L592 441 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NOTCH2NLQ7Z3S9 236 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SLC26A11Q86WA9 606 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ERO1BQ86YB8 467 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 KRTAP19-1Q8IUB9 90 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 RBM45Q8IUH3 476 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 PIANPQ8IYJ0 282 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ZBED8Q8IZ13 594 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 FAM9CQ8IZT9 166 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 OR56A4Q8NGH8 313 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 OR4Q3Q8NH05 313 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 OR5B3Q8NH48 314 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CLHC1Q8NHS4 586 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 FAM76AQ8TAV0 307 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ZNF502Q8TBZ5 544 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 TCP10LQ8TDR4 215 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PDCD6IPQ8WUM4 868 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 NEIL2Q969S2 332 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ISOC2Q96AB3 205 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 APH1AQ96BI3 265 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 FBXO17Q96EF6 278 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PGLYRP4Q96LB8 373 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PGLYRP2Q96PD5 576 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 TRNT1Q96Q11 434 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 ECSITQ9BQ95 431 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 HINT2Q9BX68 163 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 BBS2Q9BXC9 721 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SRXN1Q9BYN0 137 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 RAB1BQ9H0U4 201 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 NEUROG2Q9H2A3 272 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 TUBB1Q9H4B7 451 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CWH43Q9H720 699 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 SDF2L1Q9HCN8 221 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 PRSS16Q9NQE7 514 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 KCNIP1Q9NZI2 227 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CCDC59Q9P031 241 aaKnown RBP1.67□□□□□ -2.14
CHD3-217ENST00000574022 OR1A1Q9P1Q5 309 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CTSFQ9UBX1 484 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 CD300AQ9UGN4 299 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 ASIC3Q9UHC3 531 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 LGALS13Q9UHV8 139 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 MMP17Q9ULZ9 603 aa1.67□□□□□ -2.14
CHD3-217ENST00000574022 FANCIQ9NVI1 1328 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 CACNA1IQ9P0X4 2223 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 IGLV3-22A0A075B6J6 115 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 IGKV1D-8A0A087WSZ0 117 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 GOLGA8QA0A0J9YX86 632 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 PRSS37A4D1T9 235 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 USP27XA6NNY8 438 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 CENPXA8MT69 81 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 H7C0C1 242 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 SAP18O00422 153 aaKnown RBP1.66□□□□□ -2.14
CHD3-217ENST00000574022 MRPS12O15235 138 aaKnown RBP1.66□□□□□ -2.14
CHD3-217ENST00000574022 SLC19A2O60779 497 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 CLDN11O75508 207 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 EEDO75530 441 aaKnown RBP1.66□□□□□ -2.14
CHD3-217ENST00000574022 ETHE1O95571 254 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms