RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GUSBP08236 651 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 ITPKBP27987 946 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 NTSR1P30989 418 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 ALKBH1Q13686 389 aaKnown RBP17.37■□□□□ 0.37
SCARF1-206ENST00000573852 MANEAQ5SRI9 462 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 SLC6A19Q695T7 634 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 ADAD1Q96M93 576 aaKnown RBP17.37■□□□□ 0.37
SCARF1-206ENST00000573852 GPN1Q9HCN4 374 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-206ENST00000573852 FAM60AQ9NP50 221 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 SERINC4A6NH21 518 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 CDC123O75794 336 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-206ENST00000573852 VSIG10L2P0DP72 767 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 MECP2P51608 486 aaKnown RBP17.37■□□□□ 0.37
SCARF1-206ENST00000573852 GPM6BQ13491 265 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 ALG11Q2TAA5 492 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 SLC16A9Q7RTY1 509 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 TMPRSS12Q86WS5 348 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 EXD3Q8N9H8 876 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 MRI1Q9BV20 369 aa17.37■□□□□ 0.37
SCARF1-206ENST00000573852 TRAV8-7A0A075B6U6 113 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 A0A0J9YY10 115 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 hCG_1807616A0A1W2PRN6 198 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 TUBAL3A6NHL2 446 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 SNRPGP15A8MWD9 76 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 H3BSH0 61 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 DCTN6O00399 190 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 TMEM127O75204 238 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 GLSO94925 669 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-206ENST00000573852 APBB3O95704 486 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 CT45A8P0DMV1 189 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 CT45A9P0DMV2 189 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 PRPS1P60891 318 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 CT45A2Q5DJT8 189 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 ZNF761Q86XN6 746 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-206ENST00000573852 NSMAFQ92636 917 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 FGF14Q92915 247 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 GPX7Q96SL4 187 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-206ENST00000573852 CCDC3Q9BQI4 270 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 SLITRK2Q9H156 845 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 TACSTD2P09758 323 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 C4BPBP20851 252 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 MNDAP41218 407 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 C2orf68Q2NKX9 166 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 TMEM31Q5JXX7 168 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 PARM1Q6UWI2 310 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 DNM1P46Q6ZS02 220 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 FAM122BQ7Z309 247 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 PRSS42Q7Z5A4 293 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 OR10AC1Q8NH08 325 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 RBM18Q96H35 190 aaKnown RBP17.36■□□□□ 0.37
SCARF1-206ENST00000573852 CERS4Q9HA82 394 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 SRA1Q9HD15 236 aaKnown RBP17.36■□□□□ 0.37
SCARF1-206ENST00000573852 CPNE7Q9UBL6 633 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 ETV7Q9Y603 341 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 KCNMB2Q9Y691 235 aa17.36■□□□□ 0.37
SCARF1-206ENST00000573852 TRBV5-5A0A0J9YX44 114 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 H0YC42 278 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 PRKNO60260 465 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-206ENST00000573852 SIX6O95475 246 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 ABHD16AO95870 558 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 MAS1P04201 325 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 TNFRSF4P43489 277 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 TAGLNQ01995 201 aaKnown RBP17.35■□□□□ 0.37
SCARF1-206ENST00000573852 TFF2Q03403 129 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 MAMSTRQ6ZN01 415 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 FAM220AQ7Z4H9 259 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 JAZF1Q86VZ6 243 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 BCORP1Q8N888 145 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 MOGAT1Q96PD6 335 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 GABRG3Q99928 467 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 TMPRSS13Q9BYE2 586 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 SDHAF2Q9NX18 166 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 ING1Q9UK53 422 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-206ENST00000573852 CDK2AP1O14519 115 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 SUSD5O60279 629 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 LDOC1O95751 146 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-206ENST00000573852 MAP2K6P52564 334 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 OC90Q02509 493 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-206ENST00000573852 LTBQ06643 244 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 ERV3-1Q14264 604 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 SLC36A1Q7Z2H8 476 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 GATSQ8NAP1 163 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 ASB12Q8WXK4 309 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 CCDC74AQ96AQ1 378 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 CXorf58Q96LI9 332 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 LINC00052Q96N35 136 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 Q9N2J8 555 aa17.35■□□□□ 0.37
SCARF1-206ENST00000573852 TVP23AA6NH52 213 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 OR6C65A6NJZ3 312 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 H7C1C5 153 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 EGFP01133 1207 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 HOXB2P14652 356 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 CSRP1P21291 193 aaKnown RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 ADH7P40394 386 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 LCN6P62502 163 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 HLXQ14774 488 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 KIAA1324Q6UXG2 1013 aaKnown RBP17.34■□□□□ 0.37
SCARF1-206ENST00000573852 KCTD20Q7Z5Y7 419 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 SLC51BQ86UW2 128 aa17.34■□□□□ 0.37
SCARF1-206ENST00000573852 GLB1L2Q8IW92 636 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms