RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 A0A1W2PQL4 384 aaPredicted RBP26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 NPIPB13A6NJU9 1138 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 NPIPB4C9JG80 1138 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 MS4A18H0YCH9 400 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 LALBAP00709 142 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 PLGP00747 810 aaPredicted RBP26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 GABRA5P31644 462 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 TLE3Q04726 772 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 AIMP2Q13155 320 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 MYBPHQ13203 477 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 GPR50Q13585 617 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 MS4A18Q3C1V0 323 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 KLBQ86Z14 1044 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 MRPL48Q96GC5 212 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 FER1L6-AS2Q96M78 137 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 TIMP4Q99727 224 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 ISG20L2Q9H9L3 353 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 FANCFQ9NPI8 374 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 TRIM36Q9NQ86 728 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 STMN3Q9NZ72 180 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 SF3B6Q9Y3B4 125 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 HDGFL3Q9Y3E1 203 aa26.2■■□□□ 1.79
CTDNEP1-208ENST00000573600 SLC30A4O14863 429 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 TFP02787 698 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 MOGQ16653 247 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 SOWAHCQ53LP3 525 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 ADPRHL1Q8NDY3 354 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 JSRP1Q96MG2 331 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 GNRHR2Q96P88 292 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 SRA1Q9HD15 236 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 ANKRD10Q9NXR5 420 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 ABI3Q9P2A4 366 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 DKKL1Q9UK85 242 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 WDFY3Q8IZQ1 3526 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 CEACAM1P13688 526 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 TCEA1P23193 301 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 TAS2R43P59537 309 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 ACTA2P62736 377 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 ACTG2P63267 376 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 HSF2Q03933 536 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 GLYR1Q49A26 553 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 EEF1A1P5Q5VTE0 462 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 OR5M1Q8NGP8 315 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 RNF167Q9H6Y7 350 aa26.19■■□□□ 1.78
CTDNEP1-208ENST00000573600 PYCR1P32322 319 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 NAA10P41227 235 aaPredicted RBP26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 DAP3P51398 398 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 ABHD17BQ5VST6 288 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 IGF2-ASQ6U949 168 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 MARCH9Q86YJ5 346 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 RELTQ969Z4 430 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 C5orf34Q96MH7 638 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 TSSK2Q96PF2 358 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 VSX1Q9NZR4 365 aaPredicted RBP26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 CCDC59Q9P031 241 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 FKBP7Q9Y680 259 aa26.18■■□□□ 1.78
CTDNEP1-208ENST00000573600 PRSS37A4D1T9 235 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 A6NIZ1 184 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 G3V3Y1 287 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 H7C1C5 153 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 ZNF17P17021 662 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 CASRP41180 1078 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 CENPAP49450 140 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 RAP1BP61224 184 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 LCN6P62502 163 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 RAP1AP62834 184 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 FAM205BPQ63HN1 556 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 DACH2Q96NX9 599 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 COQ7Q99807 217 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 SLIRPQ9GZT3 109 aaKnown RBP26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 SYT4Q9H2B2 425 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 SIAEQ9HAT2 523 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 DOCK10Q96BY6 2186 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 A0A1W2PNV4 684 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 SELENOFO60613 162 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 CELP19835 753 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 RPS25P62851 125 aaKnown RBP26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 FOXK1P85037 733 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 OC90Q02509 493 aaPredicted RBP26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 SLC16A9Q7RTY1 509 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 PXKQ7Z7A4 578 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 PM20D2Q8IYS1 436 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 OR6V1Q8N148 313 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 SYS1Q8N2H4 156 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 OR5B2Q96R09 309 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 TRAPPC4Q9Y296 219 aa26.17■■□□□ 1.78
CTDNEP1-208ENST00000573600 PNMA8CA0A1B0GUJ8 204 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 NPIPA5E9PKD4 350 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 ZNF670-ZNF695F2Z2N8 137 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 ITGA3P26006 1051 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 DNASE1L1P49184 302 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 VASH1Q7L8A9 365 aaPredicted RBP26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 ZFP41Q8N8Y5 198 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 THAP4Q8WY91 577 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 C4orf36Q96KX1 117 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 TMEM185BQ9H7F4 350 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 NPIPA1Q9UND3 350 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 RPH3AQ9Y2J0 694 aaPredicted RBP26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 A3GALT2U3KPV4 340 aa26.16■■□□□ 1.78
CTDNEP1-208ENST00000573600 J3QLW9 94 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms