RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MPDZO75970 2070 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RP1P56715 2156 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 KIF26BQ2KJY2 2108 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 UNC13CQ8NB66 2214 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CACNA1IQ9P0X4 2223 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ATP6AP2A0A1C7CYW4 349 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 A0A1W2PNV4 684 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 A0A1W2PR48 441 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PQLC2LA1A4F0 135 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DCDC2BA2VCK2 349 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CPED1A4D0V7 1026 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 SHISA7A6NL88 538 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RFPL4AA6NLU0 287 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NPIPB5A8MRT5 1133 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 C2CD4DB7Z1M9 353 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RFPL4AL1F8VTS6 287 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 K7EQS6 105 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 OR7A17O14581 309 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PRMT5O14744 637 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 ACOX3O15254 700 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NBR2O15453 112 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NUPL2O15504 423 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 NKX2-8O15522 239 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TAPBPO15533 448 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 AQP9O43315 295 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CHP2O43745 196 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NARSO43776 548 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 FADS1O60427 444 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GMDSO60547 372 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 EIF1BO60739 113 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 PRAMEF2O60811 474 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 LRP3O75074 770 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ENTPD5O75356 428 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ATP6AP2O75787 350 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TNFAIP8O95379 198 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 EGFP01133 1207 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ESR1P03372 595 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RBP1P09455 135 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ALDOCP09972 364 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 RAB40ALP0C0E4 278 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NBEAP1P0C6P0 100 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 THRAP10827 490 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ADRB3P13945 408 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NID1P14543 1247 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PNLIPP16233 465 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HOXB6P17509 224 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 BMP7P18075 431 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 IMPDH1P20839 514 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZP3P21754 424 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PSMB5P28074 263 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ACADLP28330 430 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 EPHA3P29320 983 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RBMS1P29558 406 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 CCR7P32248 378 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DRD3P35462 400 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 MPLP40238 635 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ID1P41134 155 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 EIF1P41567 113 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 GDF5P43026 501 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 KIR3DL1P43629 444 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 BDKRB1P46663 353 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GABRA4P48169 554 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TTPAP49638 278 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 BLKP51451 505 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 MAPK12P53778 367 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TAS2R38P59533 333 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DNAJB13P59910 316 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ESRRGP62508 458 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HERVK_113P63132 956 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ERVK-25P63136 954 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 LCN2P80188 198 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 E2F1Q01094 437 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NAAAQ02083 359 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TFF2Q03403 129 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RIPPLY1Q0D2K3 151 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CNTN1Q12860 1018 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GAGE1Q13065 139 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HTR4Q13639 388 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CRMP1Q14194 572 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GRB7Q14451 532 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HNF4GQ14541 408 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 IL13RA2Q14627 380 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RPE65Q16518 533 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HIST2H2ACQ16777 129 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 CCSMST1Q4G0I0 132 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 AGKQ53H12 422 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TMEM196Q5HYL7 178 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CRB2Q5IJ48 1285 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ACER2Q5QJU3 275 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 LRIF1Q5T3J3 769 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HENMT1Q5T8I9 393 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 PXDC1Q5TGL8 231 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ABHD17BQ5VST6 288 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NUP210LQ5VU65 1888 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 OR2A2Q6IF42 318 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 OR52W1Q6IF63 320 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CCDC144NLQ6NUI1 221 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RPL13AP3Q6NVV1 102 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 LETMD1Q6P1Q0 360 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CD164L2Q6UWJ8 174 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms