RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 ZNF385DQ9H6B1 395 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 BEX1Q9HBH7 125 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 HHATLQ9HCP6 504 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 SLC17A7Q9P2U7 560 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 PCDHGB4Q9UN71 923 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 FAF1Q9UNN5 650 aaPredicted RBP6.03□□□□□ -1.44
SMG6-205ENST00000570659 POLR3KQ9Y2Y1 108 aaPredicted RBP6.03□□□□□ -1.44
SMG6-205ENST00000570659 SIGLEC9Q9Y336 463 aa6.03□□□□□ -1.44
SMG6-205ENST00000570659 IGKV1D-42A0A075B6H8 117 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PPIAL4EA0A075B759 164 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PPIAL4CA0A0B4J2A2 164 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 CLDN25C9JDP6 229 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PPIAL4DF5H284 164 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 POC1B-GALNT4F8VUJ3 575 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 TIMM23O14925 209 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 TM9SF1O15321 606 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SPRY3O43610 288 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 FCN3O75636 299 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SFTPBP07988 381 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SBK2P0C263 348 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PPIAL4FP0DN26 164 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 UROSP10746 265 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 ANPEPP15144 967 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 ZNF250P15622 560 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 MATN1P21941 496 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SOAT1P35610 550 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 MMP15P51511 669 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PRB3Q04118 309 aaPredicted RBP6.02□□□□□ -1.45
SMG6-205ENST00000570659 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
SMG6-205ENST00000570659 GSG1Q2KHT4 349 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SPDYE7PQ495Y7 208 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PRAMEF8Q5VWM4 474 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 PRAMEF7Q5VXH5 474 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 Q6YL49 198 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 ZCCHC23Q6ZST2 131 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 ZNF101Q8IZC7 436 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 MUC20Q8N307 709 aaPredicted RBP6.02□□□□□ -1.45
SMG6-205ENST00000570659 ARFGAP2Q8N6H7 521 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 OR56A1Q8NGH5 318 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 OR52E2Q8NGJ4 325 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 OR10S1Q8NGN2 331 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 OR4F5Q8NH21 305 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 MZB1Q8WU39 189 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 OR5P2Q8WZ92 322 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 UPRTQ96BW1 309 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 ROPN1LQ96C74 230 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 DDIT4LQ96D03 193 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 COQ8BQ96D53 544 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SLC38A1Q9H2H9 487 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 POFUT1Q9H488 388 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 TCF7L1Q9HCS4 588 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMG6-205ENST00000570659 EXOSC3Q9NQT5 275 aaKnown RBP6.02□□□□□ -1.45
SMG6-205ENST00000570659 STK38LQ9Y2H1 464 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 DNAJC15Q9Y5T4 150 aa6.02□□□□□ -1.45
SMG6-205ENST00000570659 SPIN1Q9Y657 262 aaPredicted RBP6.02□□□□□ -1.45
SMG6-205ENST00000570659 DSPPQ9NZW4 1301 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 RNF103-CHMP3A0A140T963 221 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 A0A1W2PPM1 405 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 A8MXK9 166 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 ZNF99A8MXY4 864 aaPredicted RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 LRRN3E7EW58 273 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 MS4A18H0YCH9 400 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 HMGN4O00479 90 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 ANKRD28O15084 1053 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 GPR137BO60478 399 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 GPIP06744 558 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 CHRNGP07510 517 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 TCP1P17987 556 aaKnown RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 RPS4Y1P22090 263 aaKnown RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 GATA3P23771 443 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 ECHS1P30084 290 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 WNT5AP41221 380 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 RPS5P46782 204 aaKnown RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 SH3BGRP55822 239 aaPredicted RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 RAB1AP62820 205 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 CALCOCO2Q13137 446 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 MS4A18Q3C1V0 323 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 COX20Q5RI15 118 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 MRPL2Q5T653 305 aaKnown RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 C1QTNF12Q5T7M4 302 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 GKAP1Q5VSY0 366 aaPredicted RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 C1orf140Q5VVS0 124 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 TMEM225Q6GV28 225 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 OR4F3Q6IEY1 312 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 ZNF813Q6ZN06 617 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 ZNF836Q6ZNA1 936 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 RETREG3Q86VR2 466 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 ANKRD46Q86W74 232 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 VRK2Q86Y07 508 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 C20orf196Q8IYI0 205 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 CLIP4Q8N3C7 705 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 SPATA4Q8NEY3 305 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 SFXN5Q8TD22 340 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 XAGE5Q8WWM1 108 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 IPCEF1Q8WWN9 437 aaPredicted RBP6.01□□□□□ -1.45
SMG6-205ENST00000570659 TAAR8Q969N4 342 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 SLC25A36Q96CQ1 311 aa6.01□□□□□ -1.45
SMG6-205ENST00000570659 TRIM44Q96DX7 344 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms