RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 MRPL33O75394 65 aaKnown RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 NUDT3O95989 172 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 IGLV2-14P01704 120 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 KRT6AP02538 564 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 KRT6BP04259 564 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 RBP1P09455 135 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 TMEM225BP0DP42 221 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 LYNX1P0DP58 116 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 LCN1P31025 176 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 STX2P32856 288 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 HSD17B3P37058 310 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 KRT6CP48668 564 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 SERPINB8P50452 374 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 MRPS25P82663 173 aaKnown RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 NAB1Q13506 487 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 QPRTQ15274 297 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 RASA2Q15283 850 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 EFNB3Q15768 340 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 UAP1Q16222 522 aaPredicted RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 NDUFAF6Q330K2 333 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 FAM153CQ494X1 144 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 VPS26BQ4G0F5 336 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 KLHL26Q53HC5 615 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDH13-211ENST00000568770 FAM71E1Q6IPT2 247 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 FAHD2BQ6P2I3 314 aaPredicted RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 PGBD2Q6P3X8 592 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 LRIG3Q6UXM1 1119 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 IKBIPQ70UQ0 350 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 SZRD1Q7Z422 152 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 MTERF4Q7Z6M4 381 aaKnown RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 LRRC8AQ8IWT6 810 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 ZNF786Q8N393 782 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 C17orf78Q8N4C9 275 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 LRRC17Q8N6Y2 441 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 CDRT4Q8N9R6 151 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 ATG16L2Q8NAA4 619 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 OR6Y1Q8NGX8 325 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 CEP70Q8NHQ1 597 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 RFWD2Q8NHY2 731 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 METTL6Q8TCB7 284 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 WDR60Q8WVS4 1066 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 MRPL24Q96A35 216 aaKnown RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 CIDECQ96AQ7 238 aaPredicted RBP4.84□□□□□ -1.63
CDH13-211ENST00000568770 DNAJA3Q96EY1 480 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 GIMAP5Q96F15 307 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 FAHD2AQ96GK7 314 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 C16orf58Q96GQ5 468 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 DPH5Q9H2P9 285 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 PLK3Q9H4B4 646 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 SAP30LQ9HAJ7 183 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 LPAR2Q9HBW0 351 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 TRIM36Q9NQ86 728 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 SLC17A5Q9NRA2 495 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 CA10Q9NS85 328 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 GIN1Q9NXP7 522 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 ASIC5Q9NY37 505 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 MALT1Q9UDY8 824 aa4.84□□□□□ -1.63
CDH13-211ENST00000568770 WNK1Q9H4A3 2382 aa4.84□□□□□ -1.64
CDH13-211ENST00000568770 LOC105371242A0A075B767 164 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 A8MT66 165 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 GTPBP1O00178 669 aaKnown RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 DNPH1O43598 174 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SUPT7LO94864 414 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 HSPA4LO95757 839 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 MBPP02686 304 aaPredicted RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 ERCC1P07992 297 aaPredicted RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 MSMBP08118 114 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 IFI6P09912 130 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 ALOX5P09917 674 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 DDX5P17844 614 aaKnown RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 CDH2P19022 906 aaPredicted RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 HMOX2P30519 316 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SLC1A3P43003 542 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 MAGEA4P43358 317 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 HTR6P50406 440 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 CCR4P51679 360 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 PRPS1P60891 318 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 CSNK2A1P68400 391 aaPredicted RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 TGFBR3Q03167 851 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 CALCOCO2Q13137 446 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 CBFBQ13951 182 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 PDK3Q15120 406 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 HIKESHIQ53FT3 197 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SLC25A53Q5H9E4 307 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 ANKRD26P1Q6NSI1 321 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 C3orf33Q6P1S2 294 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 TMPPEQ6ZT21 453 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 GPRIN3Q6ZVF9 776 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 BCDIN3DQ7Z5W3 292 aaKnown RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 TMCO5AQ8N6Q1 288 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 COX18Q8N8Q8 333 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 OR5W2Q8NH69 310 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 CLDND2Q8NHS1 167 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 CDS1Q92903 461 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 MS4A4EQ96PG1 132 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SLC38A2Q96QD8 506 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 KCNA7Q96RP8 456 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms