RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ATG16L2Q8NAA4 619 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 AQP11Q8NBQ7 271 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 MFSD8Q8NHS3 518 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 GNPDA2Q8TDQ7 276 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 ROBO4Q8WZ75 1007 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 MIB2Q96AX9 1013 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 SDCCAG3Q96C92 435 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 NRBF2Q96F24 287 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 ZNF845Q96IR2 970 aaPredicted RBP6.91□□□□□ -1.3
SMG1-214ENST00000568038 ADGRG7Q96K78 797 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 FEVQ99581 238 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 GPA33Q99795 319 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 TUBA1CQ9BQE3 449 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 SRXN1Q9BYN0 137 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 SMURF2Q9HAU4 748 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 KRCC1Q9NPI7 259 aaPredicted RBP6.91□□□□□ -1.3
SMG1-214ENST00000568038 NANSQ9NR45 359 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 PNPLA3Q9NST1 481 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 KIF17Q9P2E2 1029 aa6.91□□□□□ -1.3
SMG1-214ENST00000568038 TMA7Q9Y2S6 64 aaKnown RBP6.91□□□□□ -1.3
SMG1-214ENST00000568038 MGAQ8IWI9 3026 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 ZFHX4Q86UP3 3567 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TRAV27A0A087WT01 109 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 IGHV3-15A0A0B4J1V0 119 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 UNC119BA6NIH7 251 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 EIF4E1BA6NMX2 242 aaKnown RBP6.9□□□□□ -1.3
SMG1-214ENST00000568038 CLCA1A8K7I4 914 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 FTCDNL1E5RQL4 147 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 BLOC1S5-TXNDC5H3BN57 136 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 CDC42EP2O14613 210 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 PRODHO43272 600 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 SYNGR4O95473 234 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 MT-ATP6P00846 226 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 HIST1H2ABP04908 130 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 ANXA8P13928 327 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 ENPP1P22413 925 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 GRPRP30550 384 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 CTBP2P56545 445 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 NUP107P57740 925 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 RAC3P60763 192 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 CSNK2A1P68400 391 aaPredicted RBP6.9□□□□□ -1.3
SMG1-214ENST00000568038 SLC35A1P78382 337 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 IL1RL1Q01638 556 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 RBPJQ06330 500 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 SLC34A1Q06495 639 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 PMS2P3Q13401 168 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 MFSD13AQ14CX5 517 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 PON3Q15166 354 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 SOWAHCQ53LP3 525 aaPredicted RBP6.9□□□□□ -1.3
SMG1-214ENST00000568038 EMC4Q5J8M3 183 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 C1orf94Q6P1W5 598 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 C3P1Q6ZMU1 363 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 ZBTB49Q6ZSB9 765 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TMPRSS11FQ6ZWK6 438 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 HIST3H2AQ7L7L0 130 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 MAMDC2Q7Z304 686 aaPredicted RBP6.9□□□□□ -1.3
SMG1-214ENST00000568038 SLC46A3Q7Z3Q1 461 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 OAFQ86UD1 273 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TMEM99Q8N816 258 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 OR13C2Q8NGS9 318 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 OR5J2Q8NH18 312 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 OR6S1Q8NH40 331 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 OR51A7Q8NH64 312 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 FAM57AQ8TBR7 257 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 HIST1H2ACQ93077 130 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 EME1Q96AY2 570 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 ZHX1-C8orf76Q96EF9 292 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TRIB1Q96RU8 372 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 KCNJ15Q99712 375 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 NIPSNAP1Q9BPW8 284 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 PRRG4Q9BZD6 226 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 FKRPQ9H9S5 495 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TIGARQ9NQ88 270 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 SEC14L4Q9UDX3 406 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 SH3BGRL2Q9UJC5 107 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 RALYQ9UKM9 306 aaKnown RBP6.9□□□□□ -1.3
SMG1-214ENST00000568038 MGAT4BQ9UQ53 548 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TRAPPC4Q9Y296 219 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 TMEM5Q9Y2B1 443 aa6.9□□□□□ -1.3
SMG1-214ENST00000568038 PKD1L2Q7Z442 2459 aa6.9□□□□□ -1.31
SMG1-214ENST00000568038 GTF3C1Q12789 2109 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 HTR3EA5X5Y0 456 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ARRDC5A6NEK1 342 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 AHRRA9YTQ3 701 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 KDM4EB2RXH2 506 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 ZNF814B7Z6K7 855 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 C11orf98E9PRG8 122 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 SOCS2O14508 198 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 EI24O14681 340 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 SMAD9O15198 467 aaKnown RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 EIF1BO60739 113 aaKnown RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 SLC19A2O60779 497 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 RAMP1O60894 148 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 MITFO75030 526 aaPredicted RBP6.89□□□□□ -1.31
SMG1-214ENST00000568038 SERPINI2O75830 405 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 AQP8O94778 261 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 SOX14O95416 240 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 ADAP00813 363 aa6.89□□□□□ -1.31
SMG1-214ENST00000568038 IGF2P01344 180 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms