RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 NANOGNBQ7Z5D8 188 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MEX3DQ86XN8 651 aaKnown RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 WFDC8Q8IUA0 241 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 WDR31Q8NA23 367 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 POMGNT2Q8NAT1 580 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 SLC7A13Q8TCU3 470 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 BOD1Q96IK1 185 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MUS81Q96NY9 551 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 EMC6Q9BV81 110 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 POLDIP3Q9BY77 421 aaKnown RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 MUC13Q9H3R2 512 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 LIME1Q9H400 295 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 ANKRD19PQ9H560 264 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 NPAP1Q9NZP6 1156 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 ACTR3BQ9P1U1 418 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 TRBV4-1A0A0J9YWV2 114 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 A0A1W2PRQ8 180 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 SLC35F4A4IF30 521 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 OR6C65A6NJZ3 312 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 OR5H1A6NKK0 313 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 C11orf98E9PRG8 122 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 RPL36A-HNRNPH2H7BZ11 118 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 ACOT8O14734 319 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 CASKO14936 926 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 SERPINI2O75830 405 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 H1F0P07305 194 aaKnown RBP8.6□□□□□ -1.03
CLK3-220ENST00000567992 UMPSP11172 480 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 IFI30P13284 250 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 IFNGR1P15260 489 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 AHCYP23526 432 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 AQP2P41181 271 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 MAGEA2P43356 314 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 IL1RL1Q01638 556 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 BNIP1Q12981 228 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 C1DQ13901 141 aaKnown RBP8.6□□□□□ -1.03
CLK3-220ENST00000567992 DGCR6Q14129 220 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 TRIM25Q14258 630 aaKnown RBP8.6□□□□□ -1.03
CLK3-220ENST00000567992 SEC23BQ15437 767 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 BEX5Q5H9J7 111 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 MTX3Q5HYI7 312 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 PGM2L1Q6PCE3 622 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 PODNL1Q6PEZ8 512 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 CDH24Q86UP0 819 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 CYP4Z1Q86W10 505 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 C20orf196Q8IYI0 205 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 LRRC75AQ8NAA5 344 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 OR1K1Q8NGR3 316 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 MOSPD2Q8NHP6 518 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 HSD17B8Q92506 261 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 CCDC124Q96CT7 223 aaKnown RBP8.6□□□□□ -1.03
CLK3-220ENST00000567992 BPIFA2Q96DR5 249 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
CLK3-220ENST00000567992 PIK3IP1Q96FE7 263 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 PIP5K1AQ99755 562 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
CLK3-220ENST00000567992 TMEM204Q9BSN7 226 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 UPB1Q9UBR1 384 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 HIF3AQ9Y2N7 669 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 SLC25A15Q9Y619 301 aa8.6□□□□□ -1.03
CLK3-220ENST00000567992 ROS1P08922 2347 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 A0A1W2PR80 420 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 HTR3EA5X5Y0 456 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 ZNF587BE7ETH6 402 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 BLOC1S5-TXNDC5H3BN57 136 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 CDC42EP2O14613 210 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 RNF13O43567 381 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 AKAP8O43823 692 aaKnown RBP8.59□□□□□ -1.03
CLK3-220ENST00000567992 SLC43A1O75387 559 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 OR6A2O95222 327 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 PLAUP00749 431 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 FABP3P05413 133 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 ZNF26P17031 533 aaPredicted RBP8.59□□□□□ -1.03
CLK3-220ENST00000567992 IFNA8P32881 189 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 GPR4P46093 362 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 LIMS1P48059 325 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 BIDP55957 195 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 ROR2Q01974 943 aaKnown RBP8.59□□□□□ -1.03
CLK3-220ENST00000567992 RUNX1T1Q06455 604 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 CAMK2DQ13557 499 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 MELKQ14680 651 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 PPA1Q15181 289 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 STK11Q15831 433 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 DNAL1Q4LDG9 190 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 HIKESHIQ53FT3 197 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 CARD17Q5XLA6 110 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 OR7E24Q6IFN5 339 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 PAMR1Q6UXH9 720 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 ZNF730Q6ZMV8 503 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 TMPRSS11FQ6ZWK6 438 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 SLC35D2Q76EJ3 337 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 PIWIL3Q7Z3Z3 882 aaKnown RBP8.59□□□□□ -1.03
CLK3-220ENST00000567992 P2RY8Q86VZ1 359 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 DHFR2Q86XF0 187 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 C10orf67Q8IYJ2 551 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 RNF113BQ8IZP6 322 aaKnown RBP8.59□□□□□ -1.03
CLK3-220ENST00000567992 C17orf78Q8N4C9 275 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms