RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 A0A1B0GWA3 101 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 VWC2LB2RUY7 222 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 M0R082 166 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF432O94892 652 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF16P17020 682 aaPredicted RBP16.17■□□□□ 0.18
LINC01238-205ENST00000567549 SRD5A1P18405 259 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 GRPRP30550 384 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 EGR4Q05215 589 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 ADIPOQQ15848 244 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 MST1LQ2TV78 715 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 CEACAM16Q2WEN9 425 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 REP15Q6BDI9 236 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 BLOC1S3Q6QNY0 202 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 PIGWQ7Z7B1 504 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 NFKBIDQ8NI38 313 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF417Q8TAU3 575 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF587Q96SQ5 575 aaPredicted RBP16.17■□□□□ 0.18
LINC01238-205ENST00000567549 CCDC167Q9P0B6 97 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 CHST2Q9Y4C5 530 aa16.17■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF726A6NNF4 738 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 NR5A2O00482 541 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 MT-ATP6P00846 226 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 PCMT1P22061 227 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 CHN2P52757 468 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 RPS23P62266 143 aaKnown RBP16.16■□□□□ 0.18
LINC01238-205ENST00000567549 POU3F1Q03052 451 aaPredicted RBP16.16■□□□□ 0.18
LINC01238-205ENST00000567549 NPRL3Q12980 569 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 SCARB2Q14108 478 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 SQLEQ14534 574 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 MAVSQ7Z434 540 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 ARMC8Q8IUR7 673 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 SLC30A8Q8IWU4 369 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 HIPK4Q8NE63 616 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 TAAR8Q969N4 342 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 OR2M2Q96R28 347 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.16■□□□□ 0.18
LINC01238-205ENST00000567549 POFUT2Q9Y2G5 429 aa16.16■□□□□ 0.18
LINC01238-205ENST00000567549 A0A087WUJ7 227 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 hCG_2039718K7EN88 272 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 PHF1O43189 567 aaPredicted RBP16.15■□□□□ 0.18
LINC01238-205ENST00000567549 EDF1O60869 148 aaKnown RBP16.15■□□□□ 0.18
LINC01238-205ENST00000567549 NUDT7P0C024 238 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 ZNF23P17027 643 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 ATP4BP51164 291 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 HOXC5Q00444 222 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 PMS2P3Q13401 168 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 DAG1Q14118 895 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 GSG1Q2KHT4 349 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 TRMT5Q32P41 509 aaKnown RBP16.15■□□□□ 0.18
LINC01238-205ENST00000567549 KDM8Q8N371 416 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 C10orf53Q8N6V4 93 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 ANKS4BQ8N8V4 417 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 OR6N1Q8NGY5 312 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 HPS1Q92902 700 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
LINC01238-205ENST00000567549 TMEM43Q9BTV4 400 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 FGFR1OP2Q9NVK5 253 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 KLHL14Q9P2G3 628 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 B3GAT1Q9P2W7 334 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 CMAHPQ9Y471 501 aa16.15■□□□□ 0.18
LINC01238-205ENST00000567549 EBAG9O00559 213 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 FMO6PO60774 539 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 OR6A2O95222 327 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 GPX2P18283 190 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 EVX1P49640 407 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 TUBA1BP68363 451 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 TUBA4AP68366 448 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 GALK2Q01415 458 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 LGALS3BPQ08380 585 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 PUDPQ08623 228 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 RBBP4Q09028 425 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 ZSCAN26Q16670 478 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 TUBA1AQ71U36 451 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 LINGO2Q7L985 606 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 SPATA21Q7Z572 469 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 CCDC197Q8NCU1 140 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 SLC41A3Q96GZ6 507 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 FOXN4Q96NZ1 517 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 MS4A5Q9H3V2 200 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 MRPL39Q9NYK5 338 aaKnown RBP16.14■□□□□ 0.17
LINC01238-205ENST00000567549 TRIM33Q9UPN9 1127 aa16.14■□□□□ 0.17
LINC01238-205ENST00000567549 MXRA5Q9NR99 2828 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 IGHV2OR16-5A0A0B4J2B6 119 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 M0R3G1 203 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 TRAF3IP2O43734 574 aaPredicted RBP16.13■□□□□ 0.17
LINC01238-205ENST00000567549 SNX3O60493 162 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 LY6HO94772 140 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 RAB36O95755 333 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 TROVE2P10155 538 aaKnown RBP eCLIP16.13■□□□□ 0.17
LINC01238-205ENST00000567549 DAOP14920 347 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 HOXB9P17482 250 aaPredicted RBP16.13■□□□□ 0.17
LINC01238-205ENST00000567549 GIFP27352 417 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 IDH3AP50213 366 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 SNTB2Q13425 540 aaKnown RBP16.13■□□□□ 0.17
LINC01238-205ENST00000567549 OR1Q1Q15612 314 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 LIPNQ5VXI9 398 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 ZNF613Q6PF04 617 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 ZNF813Q6ZN06 617 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 PXKQ7Z7A4 578 aa16.13■□□□□ 0.17
LINC01238-205ENST00000567549 C20orf196Q8IYI0 205 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms