RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PAPD5Q8NDF8 572 aaKnown RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 STEAP2Q8NFT2 490 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 FANK1Q8TC84 345 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 KISS1RQ969F8 398 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 UTP4Q969X6 686 aaKnown RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 SPOCK3Q9BQ16 436 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 HDHD5Q9BXW7 423 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 LINC00470Q9BZP3 86 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 ENKD1Q9H0I2 346 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 OR10A4Q9H209 315 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 B3GAT2Q9NPZ5 323 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 NPDC1Q9NQX5 325 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 TAS2R5Q9NYW4 299 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 DNAJB9Q9UBS3 223 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 NDRG3Q9UGV2 375 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 PRSS50Q9UI38 385 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 TRAV27A0A087WT01 109 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ARRDC5A6NEK1 342 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF587BE7ETH6 402 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 C16orf97H3BN30 126 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 C19orf84I3L1E1 186 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 GPR37O15354 613 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 CLOCKO15516 846 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 HNRNPRO43390 633 aaKnown RBP10.76□□□□□ -0.69
SF3B3-208ENST00000567250 NDUFB2O95178 105 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 BCL10O95999 233 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 HLA-DOBP13765 273 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 IFNGR1P15260 489 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 COX5AP20674 150 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 FUT4P22083 530 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
SF3B3-208ENST00000567250 HOXC12P31275 282 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 UGT2B10P36537 528 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 SELENOPP49908 381 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ERFP50548 548 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ACTR3P61158 418 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 TGFBR3Q03167 851 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ITGADQ13349 1161 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 CCNIQ14094 377 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ZBED5Q49AG3 693 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 FAM205BPQ63HN1 556 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 RPL13AP3Q6NVV1 102 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 C1orf94Q6P1W5 598 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ZFP1Q6P2D0 407 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 SLC35D2Q76EJ3 337 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 SSX8Q7RTT4 187 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 DMRTC2Q8IXT2 367 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-208ENST00000567250 GPR137CQ8N3F9 429 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ZIC4Q8N9L1 334 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 OR13C2Q8NGS9 318 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 GNPDA2Q8TDQ7 276 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 DUS3LQ96G46 650 aaKnown RBP10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ALKBH3Q96Q83 286 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-208ENST00000567250 MCCC2Q9HCC0 563 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ARMC1Q9NVT9 282 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 MED29Q9NX70 200 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 TAS2R16Q9NYV7 291 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 GPR52Q9Y2T5 361 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 U3KQV3 271 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 FREM1Q5H8C1 2179 aa10.76□□□□□ -0.69
SF3B3-208ENST00000567250 ASH1LQ9NR48 2969 aaKnown RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 SLC35F4A4IF30 521 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 UNC119BA6NIH7 251 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 CENPBD1B2RD01 187 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 CDC42EP2O14613 210 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF432O94892 652 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 ADAP00813 363 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 IGHV3-9P01782 118 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 IGHG1P01857 330 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 IGHMP01871 453 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 F13BP05160 661 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 GSTM3P21266 225 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 FASP25445 335 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 DNAJA1P31689 397 aaKnown RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 RPL4P36578 427 aaKnown RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 AQP2P41181 271 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 KIR2DL3P43628 341 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 SH3BGRP55822 239 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 BIDP55957 195 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 FAM27E3Q08E93 113 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 FAPQ12884 760 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 TSPAN31Q12999 210 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 SFRP5Q5T4F7 317 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 TSPO2Q5TGU0 170 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 OR7E24Q6IFN5 339 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 PGBD2Q6P3X8 592 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 CXorf67Q86X51 503 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 ACBD4Q8NC06 268 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 C1orf162Q8NEQ5 155 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 OR10G2Q8NGC3 310 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 OR52L1Q8NGH7 329 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 OR4C15Q8NGM1 316 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 OR51A7Q8NH64 312 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 OR6X1Q8NH79 312 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 FNDC8Q8TC99 324 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF566Q969W8 418 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 SLC25A44Q96H78 314 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 LRR1Q96L50 414 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms