RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PIANPQ8IYJ0 282 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF100Q8IYN0 542 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 GPD1LQ8N335 351 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 OR10G3Q8NGC4 313 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 OR2AP1Q8NGE2 309 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF564Q8TBZ8 553 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 TSEN15Q8WW01 171 aaKnown RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 STARD8Q92502 1023 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ITCHQ96J02 903 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF578Q96N58 590 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 OR8B4Q96RC9 309 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 TGS1Q96RS0 853 aaKnown RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 SORT1Q99523 831 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ARHGDIGQ99819 225 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 P2RY13Q9BPV8 354 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 BPIFA3Q9BQP9 254 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 EBF4Q9BQW3 602 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 NICN1Q9BSH3 213 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 NAT9Q9BTE0 207 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 C20orf24Q9BUV8 137 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 TMEM59Q9BXS4 323 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 GBA3Q9H227 469 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 GEMIN7Q9H840 131 aaKnown RBP3.69□□□□□ -1.82
CNOT1-209ENST00000566240 LY9Q9HBG7 655 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 KCNIP1Q9NZI2 227 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 GCNT4Q9P109 453 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 VANGL2Q9ULK5 521 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 ABCC2Q92887 1545 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 HFM1A2PYH4 1435 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 CDHR2Q9BYE9 1310 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 FANCIQ9NVI1 1328 aa3.69□□□□□ -1.82
CNOT1-209ENST00000566240 CAMSAP2Q08AD1 1489 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 PLEKHH2Q8IVE3 1493 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 SHANK2Q9UPX8 1470 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 DHX57Q6P158 1386 aaKnown RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 TONSLQ96HA7 1378 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 IGLV3-22A0A075B6J6 115 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 KLF18A0A0U1RQI7 1052 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 NCF1BA6NI72 391 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 NCF1CA8MVU1 366 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 GOSR2O14653 212 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 PHOX2AO14813 284 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 OR2J3O76001 311 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 H6PDO95479 791 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 IGHV2-5P01817 119 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 GLP1RP43220 463 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 ARRB1P49407 418 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 RIPPLY3P57055 190 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 ERVK-25P63136 954 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 MRPS22P82650 360 aaKnown RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF763Q0D2J5 394 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 MERTKQ12866 999 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 MRPL23Q16540 153 aaKnown RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 KYAT1Q16773 422 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF774Q6NX45 483 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 C1orf94Q6P1W5 598 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 TRIM40Q6P9F5 258 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 TMIGD1Q6UXZ0 262 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 TMEM179BQ7Z7N9 219 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 MFSD6LQ8IWD5 586 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 OR51S1Q8NGJ8 323 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 FAM122AQ96E09 287 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 HSFY1Q96LI6 401 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 POLR2J2Q9GZM3 115 aaKnown RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 POLR2J3Q9H1A7 115 aaKnown RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 CRLF2Q9HC73 371 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 PSME2Q9UL46 239 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 ZCCHC11Q5TAX3 1644 aaKnown RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 ARHGAP5Q13017 1502 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 MAGI3Q5TCQ9 1506 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 CLASP1Q7Z460 1538 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 PRG4Q92954 1404 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-209ENST00000566240 UACAQ9BZF9 1416 aa3.68□□□□□ -1.82
CNOT1-209ENST00000566240 PLB1Q6P1J6 1458 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 USP47Q96K76 1375 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 CCL21O00585 134 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 TNFSF11O14788 317 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 SOX15O60248 233 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF780AO75290 641 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-209ENST00000566240 TIMP1P01033 207 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 C2P06681 752 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 ATP5C1P36542 298 aaKnown RBP3.67□□□□□ -1.82
CNOT1-209ENST00000566240 TNNT2P45379 298 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-209ENST00000566240 DSCR10P59022 87 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 CHRNA6Q15825 494 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 C1orf100Q5SVJ3 147 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 EIF3MQ7L2H7 374 aaKnown RBP3.67□□□□□ -1.82
CNOT1-209ENST00000566240 ASCL5Q7RTU5 278 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 ZNF546Q86UE3 836 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 OFCC1Q8IZS5 231 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 BBS1Q8NFJ9 593 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 KIFAP3Q92845 792 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 SMARCD2Q92925 531 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 ATP5SQ99766 215 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 TSG101Q99816 390 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 SH3GL1Q99961 368 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 RACGAP1Q9H0H5 632 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 SH2D2AQ9NP31 389 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 ADAP2Q9NPF8 381 aa3.67□□□□□ -1.82
CNOT1-209ENST00000566240 RPS10P5Q9NQ39 176 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms