RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NCKAP5O14513 1909 aa2.7□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3DA0A087WVF3 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3IA0A087WXS9 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3EA0A087X179 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3KA0A087X1G2 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3BA6NDS4 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3FA6NER0 549 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 ACOD1A6NK06 481 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 RFPL4AA6NLU0 287 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3LB9A6J9 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 C1QTNF3-AMACRE9PGA6 284 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 RFPL4AL1F8VTS6 287 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3HP0C7X1 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PTH2RP49190 550 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 EPHB3P54753 998 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 C21orf58P58505 322 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 HERV-K104P61576 105 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SMAD3P84022 425 aaKnown RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 TUSC3Q13454 348 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GAB1Q13480 694 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GAMTQ14353 236 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SYT14P1Q58G82 188 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 RPS26P11Q5JNZ5 115 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 GPRC6AQ5T6X5 926 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3GQ6DHY5 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3CQ6IPX1 549 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 BTNL8Q6UX41 500 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D3Q8IZP1 549 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 CLECL1Q8IZS7 167 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR4K5Q8NGD3 323 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ADAT1Q9BUB4 502 aaKnown RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 PBX4Q9BYU1 374 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TAS2R13Q9NYV9 303 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TEX13DA0A0J9YY54 714 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 KDM4FA0A1W2PPD8 638 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 RAB29O14966 203 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 CLDN11O75508 207 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 AK1P00568 194 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SDHAP31040 664 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ECI1P42126 302 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC11A2P49281 568 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 CDH4P55283 916 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ZNF616Q08AN1 781 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 MPPED2Q15777 294 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 BSXQ3C1V8 233 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 CT83Q5H943 113 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TMEM244Q5VVB8 128 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TMEM108Q6UXF1 575 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GOLGA7Q7Z5G4 137 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 IQCF1Q8N6M8 205 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR52J3Q8NH60 311 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR56B4Q8NH76 319 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 LINC01599Q8WXQ3 324 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ZNF558Q96NG5 402 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC6A16Q9GZN6 736 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ARL6Q9H0F7 186 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PIGMQ9H3S5 423 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 B4GALT7Q9UBV7 327 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 MSRAQ9UJ68 235 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ZNF217O75362 1048 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GJB3O75712 270 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 HLA-DPB1P04440 258 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ELFN1P0C7U0 828 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 NQO2P16083 231 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 RBP2P50120 134 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SORDQ00796 357 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ZNF630Q2M218 657 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 C2orf68Q2NKX9 166 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC25A35Q3KQZ1 300 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ITPRIPL2Q3MIP1 535 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 C18orf63Q68DL7 685 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 NHLRC1Q6VVB1 395 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ANKRD33Q7Z3H0 272 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR6X1Q8NH79 312 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 MYLIPQ8WY64 445 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 HIST1H2AAQ96QV6 131 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 IPPKQ9H8X2 491 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ZDHHC8Q9ULC8 765 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 FAM96BQ9Y3D0 163 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 KANTRA0A1W2PQU2 76 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PIRO00625 290 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR2T1O43869 369 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ACP2P11117 423 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR1G1P47890 313 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ID4P47928 161 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC6A11P48066 632 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PAFAH1B2P68402 229 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 EFNB1P98172 346 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SEMG2Q02383 582 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 FABP9Q0Z7S8 132 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GGTA1PQ4G0N0 100 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ADIPOR2Q86V24 386 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SVBPQ8N300 66 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SDR9C7Q8NEX9 313 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 KCNG3Q8TAE7 436 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SMOQ99835 787 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 NELFAQ9H3P2 528 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 MYNNQ9NPC7 610 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC2A4RGQ9NR83 387 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SBF1O95248 1867 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms