RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 POLQO75417 2590 aa18.58■□□□□ 0.56
SHCBP1-205ENST00000566016 AKAP6Q13023 2319 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 TRBV4-1A0A0J9YWV2 114 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 FAM221AA4D161 298 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 NPIPB13A6NJU9 1138 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 NPIPB4C9JG80 1138 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 RNF13O43567 381 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 KRT36O76013 467 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 GADD45GO95257 159 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 PRF1P14222 555 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 SPIBQ01892 262 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 CHRNB3Q05901 458 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 RPL18Q07020 188 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 FOXD4Q12950 439 aaPredicted RBP18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 BHLHA15Q7RTS1 189 aaPredicted RBP18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 P2RY8Q86VZ1 359 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 C1orf162Q8NEQ5 155 aaPredicted RBP18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 S100PBPQ96BU1 408 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 ADAD1Q96M93 576 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 OR2M2Q96R28 347 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 MCCC2Q9HCC0 563 aa18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 KRCC1Q9NPI7 259 aaPredicted RBP18.57■□□□□ 0.56
SHCBP1-205ENST00000566016 A6NNC1 897 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 C11orf98E9PRG8 122 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 BLOC1S5-TXNDC5H3BN57 136 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 SLC43A1O75387 559 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 LYZL6O75951 148 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 ITGA5P08648 1049 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 RAP2AP10114 183 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 SAGP10523 405 aaPredicted RBP18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 MAKP20794 623 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 MPGP29372 298 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 TGFBR3Q03167 851 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 C1QTNF12Q5T7M4 302 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 TBPL2Q6SJ96 375 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 ADGRG5Q8IZF4 528 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 OR4K5Q8NGD3 323 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 BOD1Q96IK1 185 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 LRR1Q96L50 414 aa18.56■□□□□ 0.56
SHCBP1-205ENST00000566016 SH3PXD2BA1X283 911 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 ZNF587BE7ETH6 402 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 RPL36A-HNRNPH2H7BZ11 118 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 CRYGSP22914 178 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 RRM2P31350 389 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 DNAJA1P31689 397 aaKnown RBP18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 LIMS1P48059 325 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 HMGA2P52926 109 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 TLE4Q04727 773 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 SEC23BQ15437 767 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 OR7E24Q6IFN5 339 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 CCDC121Q6ZUS5 278 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 OAFQ86UD1 273 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 OR52J3Q8NH60 311 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 OR6X1Q8NH79 312 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 ALKBH3Q96Q83 286 aaPredicted RBP18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 MED29Q9NX70 200 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 CADP27708 2225 aa18.55■□□□□ 0.56
SHCBP1-205ENST00000566016 ROS1P08922 2347 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 DHRS12A0PJE2 317 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 SLC35F4A4IF30 521 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 EFCAB9A8MZ26 197 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 EBAG9O00559 213 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 CASKO14936 926 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 CTAG2O75638 210 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 IFNGR1P15260 489 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 OMPP47874 163 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 SH3BGRP55822 239 aaPredicted RBP18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 CBX1P83916 185 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 TIMM23BQ5SRD1 257 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 ANKRD34AQ69YU3 496 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 C22orf34Q6ZV56 151 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 SLC35D2Q76EJ3 337 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 ASRGL1Q7L266 308 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 HDDC2Q7Z4H3 204 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 C17orf78Q8N4C9 275 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 HSD17B8Q92506 261 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 MUS81Q96NY9 551 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 TEX15Q9BXT5 2789 aa18.54■□□□□ 0.56
SHCBP1-205ENST00000566016 TCRBV3S1A0A5B6 114 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 OR5H1A6NKK0 313 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 CDC42EP2O14613 210 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 KRT33AO76009 404 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 THBDP07204 575 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 AQP2P41181 271 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 GPR4P46093 362 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 DAP3P51398 398 aaKnown RBP18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 PRPS1P60891 318 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 FHL1Q13642 323 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 GK3PQ14409 553 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 TSC22D1Q15714 1073 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 C20orf196Q8IYI0 205 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 TXNDC15Q96J42 360 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 ALPK1Q96QP1 1244 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 INIPQ9NRY2 104 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 LYVE1Q9Y5Y7 322 aa18.53■□□□□ 0.56
SHCBP1-205ENST00000566016 A0A1W2PRG6 482 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 ZNF726A6NNF4 738 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 CENPBD1B2RD01 187 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 CLOCKO15516 846 aa18.52■□□□□ 0.56
SHCBP1-205ENST00000566016 KLF4O43474 513 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms