RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 MED12LQ86YW9 2145 aa13.59□□□□□ -0.23
KNOP1-203ENST00000565844 MBD3L4A6NDZ8 208 aaPredicted RBP13.58□□□□□ -0.23
KNOP1-203ENST00000565844 MBD3L3A6NE82 208 aaPredicted RBP13.58□□□□□ -0.23
KNOP1-203ENST00000565844 MBD3L5A6NJ08 208 aaPredicted RBP13.58□□□□□ -0.23
KNOP1-203ENST00000565844 ZNF716A6NP11 495 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 HLA-DOBP13765 273 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 ZNF43P17038 809 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 CDH2P19022 906 aaPredicted RBP13.58□□□□□ -0.23
KNOP1-203ENST00000565844 SLC6A6P31641 620 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 CA7P43166 264 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 PTDSS1P48651 473 aaKnown RBP13.58□□□□□ -0.23
KNOP1-203ENST00000565844 SLC16A1P53985 500 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 RAD23AP54725 363 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 RFX4Q33E94 735 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 CLEC12AQ5QGZ9 265 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 EEF1A1P5Q5VTE0 462 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 GTF2IRD2BQ6EKJ0 949 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 PXKQ7Z7A4 578 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 GTF2IRD2Q86UP8 949 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 FJX1Q86VR8 437 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 OR9K2Q8NGE7 335 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 OR8D4Q8NGM9 314 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 MBD3L2Q8NHZ7 208 aaPredicted RBP13.58□□□□□ -0.23
KNOP1-203ENST00000565844 TTYH2Q9BSA4 534 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 IFT27Q9BW83 186 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 VCX3BQ9H321 246 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 RIBC2Q9H4K1 309 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 FANCFQ9NPI8 374 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 IL20Q9NYY1 176 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 EMC3Q9P0I2 261 aa13.58□□□□□ -0.23
KNOP1-203ENST00000565844 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 ITPR2Q14571 2701 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 LOC102725191A0A1B0GVB3 256 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 A0A1W2PRG6 482 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 PPP1R3DO95685 299 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 CTXN1P60606 82 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 ESRRGP62508 458 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 TOP3AQ13472 1001 aaPredicted RBP13.58□□□□□ -0.24
KNOP1-203ENST00000565844 PDK3Q15120 406 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 POU4F3Q15319 338 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 SNCBQ16143 134 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 ZIK1Q3SY52 487 aaPredicted RBP13.58□□□□□ -0.24
KNOP1-203ENST00000565844 OR2A2Q6IF42 318 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 DPY19L2P2Q6ZN68 376 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 SEM1Q6ZVN7 128 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 GCNT2Q8N0V5 402 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 LRRC75AQ8NAA5 344 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 TSSK6Q9BXA6 273 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 GABARAPL3Q9BY60 117 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 POLDIP3Q9BY77 421 aaKnown RBP13.58□□□□□ -0.24
KNOP1-203ENST00000565844 SMPD3Q9NY59 655 aaPredicted RBP13.58□□□□□ -0.24
KNOP1-203ENST00000565844 ING1Q9UK53 422 aaPredicted RBP13.58□□□□□ -0.24
KNOP1-203ENST00000565844 CLEC4AQ9UMR7 237 aa13.58□□□□□ -0.24
KNOP1-203ENST00000565844 IGKV3D-15A0A087WSY6 115 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 WIPF3A6NGB9 483 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 GPR171O14626 319 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 TRAF3IP2O43734 574 aaPredicted RBP13.57□□□□□ -0.24
KNOP1-203ENST00000565844 ZG16O60844 167 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 STSP08842 583 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 GLI4P10075 376 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 IFNGR1P15260 489 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 DAP3P51398 398 aaKnown RBP13.57□□□□□ -0.24
KNOP1-203ENST00000565844 CRISP1P54107 249 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 PER3P56645 1201 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 ERVK-25P63136 954 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 CREB3L2Q70SY1 520 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 SLC35D2Q76EJ3 337 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 TUSC5Q8IXB3 177 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
KNOP1-203ENST00000565844 INTS12Q96CB8 462 aaKnown RBP13.57□□□□□ -0.24
KNOP1-203ENST00000565844 GMPPAQ96IJ6 420 aaPredicted RBP13.57□□□□□ -0.24
KNOP1-203ENST00000565844 ZNF570Q96NI8 536 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 GPX7Q96SL4 187 aaPredicted RBP13.57□□□□□ -0.24
KNOP1-203ENST00000565844 TOR3AQ9H497 397 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 BCO1Q9HAY6 547 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 GP6Q9HCN6 339 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 GLRX2Q9NS18 164 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 MED29Q9NX70 200 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 MEMO1Q9Y316 297 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 ADAM18Q9Y3Q7 739 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 FLVCR1Q9Y5Y0 555 aa13.57□□□□□ -0.24
KNOP1-203ENST00000565844 ZNF724A8MTY0 619 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 E9PLN8 166 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 SS18L1O75177 396 aaPredicted RBP13.56□□□□□ -0.24
KNOP1-203ENST00000565844 TOXO94900 526 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 SNAP29O95721 258 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 IL2RAP01589 272 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 IGHMP01871 453 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 YES1P07947 543 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 CD14P08571 375 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 TIMP3P35625 211 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 POLR2IP36954 125 aaKnown RBP13.56□□□□□ -0.24
KNOP1-203ENST00000565844 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 CLDN17P56750 224 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 NOTCH2Q04721 2471 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 PMPCAQ10713 525 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 NPRL3Q12980 569 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 MELKQ14680 651 aa13.56□□□□□ -0.24
KNOP1-203ENST00000565844 GINS1Q14691 196 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms