RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SH3BGRP55822 239 aaPredicted RBP16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 SLC25A3Q00325 362 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 PIN1Q13526 163 aaPredicted RBP16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 Q5PR19 223 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 CARD17Q5XLA6 110 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 C8orf82Q6P1X6 216 aaPredicted RBP16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 ANKRD16Q6P6B7 361 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 TXNDC15Q96J42 360 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 PRSS27Q9BQR3 290 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF426Q9BUY5 554 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 GSX2Q9BZM3 304 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 CRLF2Q9HC73 371 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 B3GAT2Q9NPZ5 323 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 FAIMQ9NVQ4 179 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 MED29Q9NX70 200 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 GMPR2Q9P2T1 348 aaKnown RBP16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF229Q9UJW7 825 aa16.06■□□□□ 0.16
SYNGR3-204ENST00000564642 A0A096LPE4 126 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 A0A1W2PPZ6 126 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 SLC35F4A4IF30 521 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 M0R3G1 203 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 RNF13O43567 381 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 MT-ND1P03886 318 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 HOXB1P14653 301 aaPredicted RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 RBM34P42696 430 aaKnown RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 GSK3BP49841 420 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 PSME3P61289 254 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 ARF1P84077 181 aaKnown RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 CEACAM16Q2WEN9 425 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 PRSS57Q6UWY2 283 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 NKAIN4Q8IVV8 208 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 TMEM123Q8N131 208 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 LRRC17Q8N6Y2 441 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 MAGEE2Q8TD90 523 aaPredicted RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 TMEM255BQ8WV15 326 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 BCL2L2Q92843 193 aaPredicted RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 GTPBP3Q969Y2 492 aaKnown RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 TRMT61AQ96FX7 289 aaKnown RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 LRR1Q96L50 414 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 HS6ST2Q96MM7 605 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 KCTD14Q9BQ13 255 aaPredicted RBP16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 ROS1P08922 2347 aa16.05■□□□□ 0.16
SYNGR3-204ENST00000564642 MTORP42345 2549 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF682O95780 498 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 SOD3P08294 240 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 DANCRP0C864 163 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 THRBP10828 461 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 SPOCK1Q08629 439 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 ST3GAL3Q11203 375 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 ZP4Q12836 540 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 CAMK2DQ13557 499 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 PGGHGQ32M88 737 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 FKBP9P1Q75LS8 142 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 KRTAP1-3Q8IUG1 177 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 C20orf196Q8IYI0 205 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 OR6N1Q8NGY5 312 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 TMEM239Q8WW34 195 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 MEPEQ9NQ76 525 aaPredicted RBP16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF701Q9NV72 531 aaPredicted RBP16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 TAS2R5Q9NYW4 299 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 ARL2BPQ9Y2Y0 163 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 ATP23Q9Y6H3 246 aa16.04■□□□□ 0.16
SYNGR3-204ENST00000564642 CADP27708 2225 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ARPC4-TTLL3A0A0A6YYG9 625 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ZNF99A8MXY4 864 aaPredicted RBP16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 BLOC1S5-TXNDC5H3BN57 136 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 SERPINA1P01009 418 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 IFNW1P05000 195 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ASAH2BP0C7U1 165 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 IFNGR1P15260 489 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 FOSL1P15407 271 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 PAX1P15863 534 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 FUT1P19526 365 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 BIDP55957 195 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ATP5J2P56134 94 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 PHYHD1Q5SRE7 291 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 AGAP6Q5VW22 663 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 NHLRC1Q6VVB1 395 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 CBLL1Q75N03 491 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 SLC35D2Q76EJ3 337 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 NANOGNBQ7Z5D8 188 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 VTCN1Q7Z7D3 282 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 FAM162AQ96A26 154 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 SGTBQ96EQ0 304 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 PRRC1Q96M27 445 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ADAD1Q96M93 576 aaKnown RBP16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 KCNS3Q9BQ31 491 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 MOV10Q9HCE1 1003 aaKnown RBP16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 SPAG4Q9NPE6 437 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ADA2Q9NZK5 511 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ABCD2Q9UBJ2 740 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 ARID1AO14497 2285 aa16.03■□□□□ 0.16
SYNGR3-204ENST00000564642 E7EQL1 145 aa16.02■□□□□ 0.16
SYNGR3-204ENST00000564642 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
SYNGR3-204ENST00000564642 YAP1P46937 504 aaKnown RBP16.02■□□□□ 0.16
SYNGR3-204ENST00000564642 FABP6P51161 128 aa16.02■□□□□ 0.16
SYNGR3-204ENST00000564642 UGT2B15P54855 530 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms