RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DUXAA6NLW8 204 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 RNASET2O00584 256 aaKnown RBP8.81□□□□□ -1
SF3B3-204ENST00000563739 BIRC5O15392 142 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 CFLARO15519 480 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 SLC43A1O75387 559 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 LYPLA1O75608 230 aaPredicted RBP8.81□□□□□ -1
SF3B3-204ENST00000563739 HPRP00739 348 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ERCC1P07992 297 aaPredicted RBP8.81□□□□□ -1
SF3B3-204ENST00000563739 PAX7P23759 505 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 GLRXP35754 106 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 SERPINB5P36952 375 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 RPL3P39023 403 aaKnown RBP8.81□□□□□ -1
SF3B3-204ENST00000563739 MVDP53602 400 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 SLC18A1P54219 525 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 CLDN17P56750 224 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ERVS71-1P61550 626 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 MVKQ03426 396 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 SCGB2A2Q13296 93 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ALKBH6Q3KRA9 238 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 C1orf140Q5VVS0 124 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ACSM5Q6NUN0 579 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ZNF836Q6ZNA1 936 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 NUDCD3Q8IVD9 361 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ANKRD42Q8N9B4 389 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 PPP3R2Q96LZ3 170 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ZNF385DQ9H6B1 395 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ATAD3AQ9NVI7 634 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ASIC5Q9NY37 505 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.81□□□□□ -1
SF3B3-204ENST00000563739 WIPI2Q9Y4P8 454 aa8.81□□□□□ -1
SF3B3-204ENST00000563739 IGKV1D-42A0A075B6H8 117 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 A0A0G2JMP0 313 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 A0A0X1KG70 313 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 WDR91A4D1P6 747 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 CDHR4A6H8M9 788 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 CFAP73A6NFT4 308 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 ZNF99A8MXY4 864 aaPredicted RBP8.8□□□□□ -1
SF3B3-204ENST00000563739 TMEM114B3SHH9 223 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 J3QLI3 93 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 CDC14BO60729 498 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 SERPINE1P05121 402 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 RNASE1P07998 156 aaKnown RBP8.8□□□□□ -1
SF3B3-204ENST00000563739 HLA-DOBP13765 273 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 PRPS1L1P21108 318 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 MAP2K6P52564 334 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 CLDN8P56748 225 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 WDR4P57081 412 aaKnown RBP8.8□□□□□ -1
SF3B3-204ENST00000563739 CHI3L2Q15782 390 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 SPRNQ5BIV9 151 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 COX20Q5RI15 118 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 PRAMEF8Q5VWM4 474 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 PRAMEF7Q5VXH5 474 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 COMTD1Q86VU5 262 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 VRK2Q86Y07 508 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 CMIPQ8IY22 773 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 BPIFB2Q8N4F0 458 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 NATD1Q8N6N6 113 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 OR4M2Q8NGB6 313 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 OR8J2Q8NGG1 315 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 OR4A15Q8NGL6 344 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 AGR3Q8TD06 166 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 MGARPQ8TDB4 240 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 WFDC12Q8WWY7 111 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 KTI12Q96EK9 354 aaPredicted RBP8.8□□□□□ -1
SF3B3-204ENST00000563739 ZNF416Q9BWM5 594 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 SLITRK2Q9H156 845 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 MOV10Q9HCE1 1003 aaKnown RBP8.8□□□□□ -1
SF3B3-204ENST00000563739 SLC52A3Q9NQ40 469 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 EXD2Q9NVH0 621 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 DCAF16Q9NXF7 216 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 NKIRAS1Q9NYS0 192 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 LEF1Q9UJU2 399 aaPredicted RBP8.8□□□□□ -1
SF3B3-204ENST00000563739 RASD1Q9Y272 281 aa8.8□□□□□ -1
SF3B3-204ENST00000563739 C17orf100A8MU93 164 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 A8MVM7 634 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 KRT33AO76009 404 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 VAMP5O95183 116 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 BCL10O95999 233 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 TFPTP0C1Z6 253 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 BGNP21810 368 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 UQCRC2P22695 453 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 MAPK1P28482 360 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 CDKN2CP42773 168 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 CCL8P80075 99 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 PGS1Q32NB8 556 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 HHATQ5VTY9 493 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 DCAF12L2Q5VW00 463 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 TMEM225Q6GV28 225 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 LEG1Q6P5S2 330 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 C20orf196Q8IYI0 205 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 CLIP4Q8N3C7 705 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 FNDC5Q8NAU1 212 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 NANPQ8TBE9 248 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 TEX37Q96LM6 180 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 TRNT1Q96Q11 434 aaKnown RBP8.79□□□□□ -1
SF3B3-204ENST00000563739 PAIP2Q9BPZ3 127 aaKnown RBP8.79□□□□□ -1
SF3B3-204ENST00000563739 MS4A5Q9H3V2 200 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 MMP26Q9NRE1 261 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 SLC6A13Q9NSD5 602 aa8.79□□□□□ -1
SF3B3-204ENST00000563739 RYR2Q92736 4967 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms