RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 C3orf49Q96BT1 292 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PITX2Q99697 317 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CDCP1Q9H5V8 836 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 GPR52Q9Y2T5 361 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 COL4A6Q14031 1691 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CDHR4A6H8M9 788 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CIDEAO60543 219 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PRAMEF4O60810 478 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 TBXA2RP21731 343 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 MMP11P24347 488 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 EIF1AXP47813 144 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 NOVA1P51513 510 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 ADAM8P78325 824 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 FOXK1P85037 733 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 FGFBP1Q14512 234 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 TMEM244Q5VVB8 128 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PRAMEF9Q5VWM5 478 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 FAHD1Q6P587 224 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 SLC22A18ASQ8N1D0 253 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 ZBTB44Q8NCP5 570 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 OR2T27Q8NH04 317 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 NUBPLQ8TB37 319 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 CORO2AQ92828 525 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 AGAP4Q96P64 663 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 ZNF251Q9BRH9 671 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 VN1R1Q9GZP7 353 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PLCXD1Q9NUJ7 323 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PAK1IP1Q9NWT1 392 aaPredicted RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 EIF3KQ9UBQ5 218 aaKnown RBP6.93□□□□□ -1.3
TCF4-216ENST00000562680 CHRNA9Q9UGM1 479 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 PSORS1C1Q9UIG5 152 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 SLC7A11Q9UPY5 501 aa6.93□□□□□ -1.3
TCF4-216ENST00000562680 MN1Q10571 1320 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 A0A087WUU8 490 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 DISC1C4P0D8 188 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 CSTBP04080 98 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 PRICKLE4Q2TBC4 344 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 TMEM176BQ3YBM2 270 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 CEACAM19Q7Z692 300 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 NAXDQ8IW45 347 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 JAGN1Q8N5M9 183 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 SDR9C7Q8NEX9 313 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 DTD1Q8TEA8 209 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 PHYHIPQ92561 330 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 SPACA9Q96E40 222 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 S100A16Q96FQ6 103 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 FRMD6Q96NE9 622 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 TSNAXQ99598 290 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 SLC30A2Q9BRI3 323 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 KATNB1Q9BVA0 655 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 FUNDC2Q9BWH2 189 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 TMEM121BQ9BXQ6 578 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 FAM60AQ9NP50 221 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 POLE4Q9NR33 117 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 PILRBQ9UKJ0 227 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 DIMT1Q9UNQ2 313 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 TRAV27A0A087WT01 109 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 C4orf47A7E2U8 309 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 NDUFS8O00217 210 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 EML2O95834 649 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 HTR1FP30939 366 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 POU3F1Q03052 451 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 BAMBIQ13145 260 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 B3GNT8Q7Z7M8 397 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 FOXRED2Q8IWF2 684 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 ZADH2Q8N4Q0 377 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 FAM26EQ8N5C1 309 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 CYB561A3Q8NBI2 242 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 ZNF417Q8TAU3 575 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 GPR148Q8TDV2 347 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 SLCO4A1Q96BD0 722 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 TM4SF19Q96DZ7 209 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 SCGB3A2Q96PL1 93 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 GPR87Q9BY21 358 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 UBQLN3Q9H347 655 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 WDR54Q9H977 334 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 SEMA4GQ9NTN9 838 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 DOCK6Q96HP0 2047 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 SHISA7A6NL88 538 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 EIF1AYO14602 144 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 FCMRO60667 390 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 GATBO75879 557 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 PCBP3P57721 371 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 DYRK1AQ13627 763 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 BCL2L15Q5TBC7 163 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 C8orf82Q6P1X6 216 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 ASB18Q6ZVZ8 466 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 H1FNTQ75WM6 255 aaPredicted RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 MARCH3Q86UD3 253 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 RRNAD1Q96FB5 475 aaKnown RBP6.92□□□□□ -1.3
TCF4-216ENST00000562680 ABCB9Q9NP78 766 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 COPS3Q9UNS2 423 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 CMAHPQ9Y471 501 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 R4GN57 208 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 HSBP1L1C9JCN9 74 aa6.92□□□□□ -1.3
TCF4-216ENST00000562680 HCKP08631 526 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms