RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 KLHL12Q53G59 568 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 LCN1P1Q5VSP4 162 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 LEG1Q6P5S2 330 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 ASB18Q6ZVZ8 466 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 KCTD8Q6ZWB6 473 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 SLC35D2Q76EJ3 337 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 CHMP1BQ7LBR1 199 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 FAM122BQ7Z309 247 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 SPARTQ8N0X7 666 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 MEIOBQ8N635 442 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 LSM14AQ8ND56 463 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 OR2V1Q8NHB1 315 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 C9orf43Q8TAL5 461 aaPredicted RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 NEIL3Q8TAT5 605 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 PTP4A1Q93096 173 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 RASD2Q96D21 266 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 TMEM80Q96HE8 168 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 SNX18Q96RF0 628 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 NMNAT3Q96T66 252 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 TEAD3Q99594 435 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 DEFB127Q9H1M4 99 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 OR51V1Q9H2C8 321 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 FKBP14Q9NWM8 211 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 NDUFA13Q9P0J0 144 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 MOKQ9UQ07 419 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 DCHS1Q96JQ0 3298 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 ANKRD11Q6UB99 2663 aaPredicted RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 PTPRQQ9UMZ3 2332 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 TRGV5A0A0B4J1U4 118 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 FAM183AA6NL82 134 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 TNFSF11O14788 317 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 SYNGR4O95473 234 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 PLGP00747 810 aaPredicted RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 ZNF24P17028 368 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 MYL12AP19105 171 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 DCKP27707 260 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 TTKP33981 857 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 CDKN2AP42771 156 aaKnown RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 EIF1AXP47813 144 aaKnown RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 CENPAP49450 140 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 STARP49675 285 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 BLVRAP53004 296 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 SLC25A1P53007 311 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 H3F3AP84243 136 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 POU3F1Q03052 451 aaPredicted RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 MVKQ03426 396 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 POU4F2Q12837 409 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 SLC35D3Q5M8T2 416 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 NIPAL3Q6P499 406 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 Q6ZS92 163 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 BCDIN3DQ7Z5W3 292 aaKnown RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 GPAT4Q86UL3 456 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 UBQLNLQ8IYU4 475 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 KDM8Q8N371 416 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 CYB561A3Q8NBI2 242 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 NPEPL1Q8NDH3 523 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 SDR9C7Q8NEX9 313 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 OR2T4Q8NH00 348 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 FNDC8Q8TC99 324 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 FCGR1BQ92637 280 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 CPNE4Q96A23 557 aaPredicted RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 RNFT2Q96EX2 444 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 CRELD1Q96HD1 420 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 ADAD1Q96M93 576 aaKnown RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 TSPAN32Q96QS1 320 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 RBP7Q96R05 134 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 MYCBPQ99417 103 aaPredicted RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 ZDHHC11Q9H8X9 412 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 PAK1IP1Q9NWT1 392 aaPredicted RBP9.23□□□□□ -0.93
USP3-219ENST00000561326 TNFRSF10DQ9UBN6 386 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 SEC14L4Q9UDX3 406 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 ERGIC3Q9Y282 383 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 B3GNT3Q9Y2A9 372 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 RAXQ9Y2V3 346 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 CACNA1CQ13936 2221 aa9.23□□□□□ -0.93
USP3-219ENST00000561326 DMXL2Q8TDJ6 3036 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 A0A087WV48 116 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 PRSS37A4D1T9 235 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 OR6C68A6NDL8 312 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 ZNF726A6NNF4 738 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 CENPBD1B2RD01 187 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 NPIPA2E9PIF3 369 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 NPIPA3F8WFD2 350 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 AKAP8O43823 692 aaKnown RBP9.22□□□□□ -0.93
USP3-219ENST00000561326 RAB36O95755 333 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 CRYABP02511 175 aaKnown RBP9.22□□□□□ -0.93
USP3-219ENST00000561326 TFAP2AP05549 437 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 STSP08842 583 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 CELA3AP09093 270 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 NR2C1P13056 603 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 IFNGR1P15260 489 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 JUNBP17275 347 aaPredicted RBP9.22□□□□□ -0.93
USP3-219ENST00000561326 CRABP1P29762 137 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 CD97P48960 835 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 LHX2P50458 406 aa9.22□□□□□ -0.93
USP3-219ENST00000561326 CLDN15P56746 228 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms