RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 HRASLS5Q96KN8 279 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 TNFRSF13CQ96RJ3 184 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 MBOAT4Q96T53 435 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 PITX2Q99697 317 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 SF3B5Q9BWJ5 86 aaKnown RBP4.88□□□□□ -1.63
ZEB1-220ENST00000560909 SRXN1Q9BYN0 137 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 ENKD1Q9H0I2 346 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 VCX3BQ9H321 246 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 GSX1Q9H4S2 264 aaPredicted RBP4.88□□□□□ -1.63
ZEB1-220ENST00000560909 CALHM2Q9HA72 323 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 SLC25A19Q9HC21 320 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 CHST11Q9NPF2 352 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 KRCC1Q9NPI7 259 aaPredicted RBP4.88□□□□□ -1.63
ZEB1-220ENST00000560909 NRIP3Q9NQ35 241 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 NANSQ9NR45 359 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 PAPOLBQ9NRJ5 636 aaKnown RBP4.88□□□□□ -1.63
ZEB1-220ENST00000560909 ASF1BQ9NVP2 202 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 CLCF1Q9UBD9 225 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 ENOPH1Q9UHY7 261 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 ING1Q9UK53 422 aaPredicted RBP4.88□□□□□ -1.63
ZEB1-220ENST00000560909 NDRG4Q9ULP0 352 aaKnown RBP4.88□□□□□ -1.63
ZEB1-220ENST00000560909 NPIPA1Q9UND3 350 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 RASD1Q9Y272 281 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF175Q9Y473 711 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 LRRC42Q9Y546 428 aa4.88□□□□□ -1.63
ZEB1-220ENST00000560909 MYO18BQ8IUG5 2567 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SHANK1Q9Y566 2161 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 A0A1B0GTH9 108 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF716A6NP11 495 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF724A8MTY0 619 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CENPBD1B2RD01 187 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 H0YAE9 185 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 H0YC42 278 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 H3BML4 177 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SULT2B1O00204 365 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 KPNA4O00629 521 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 BHLHE40O14503 412 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 IMPA2O14732 288 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TNFSF11O14788 317 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SMAD9O15198 467 aaKnown RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TRAF3IP2O43734 574 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 AHCYL1O43865 530 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CXCL13O43927 109 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CYTIPO60759 359 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 MITFO75030 526 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF432O94892 652 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 NDUFB2O95178 105 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SNAP29O95721 258 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CD14P08571 375 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TFPIP10646 304 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 KLK2P20151 261 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CCNA2P20248 432 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 IGFBP5P24593 272 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 EPHA2P29317 976 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SFTPDP35247 375 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 PTGS2P35354 604 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 POLR2IP36954 125 aaKnown RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 GPR4P46093 362 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 RPS6KA3P51812 740 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ZNF133P52736 654 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CRISP1P54107 249 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 RAD23AP54725 363 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TPD52P55327 224 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 RPS3AP61247 264 aaKnown RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 RPL18Q07020 188 aaKnown RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 NPRL3Q12980 569 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 LY6DQ14210 128 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TOMM20Q15388 145 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TAF11Q15544 211 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 OR7A5Q15622 319 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SNCBQ16143 134 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SLC36A3Q495N2 470 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 GXYLT1Q4G148 440 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SLC25A30Q5SVS4 291 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 PDSS1Q5T2R2 415 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ARMC4Q5T2S8 1044 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SLX4IPQ5VYV7 408 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 NSUN5P2Q63ZY6 315 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 C12orf73Q69YU5 71 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 HBMQ6B0K9 141 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 RTL6Q6ICC9 239 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SMARCD3Q6STE5 483 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 OAFQ86UD1 273 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CCDC71Q8IV32 467 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TMEM99Q8N816 258 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ZIC4Q8N9L1 334 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ATG16L2Q8NAA4 619 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 ST6GALNAC3Q8NDV1 305 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 OR13C2Q8NGS9 318 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 MOSPD2Q8NHP6 518 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 FAM57AQ8TBR7 257 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 MAGEE2Q8TD90 523 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 RNF128Q8TEB7 428 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 TRUB1Q8WWH5 349 aaKnown RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 CPNE4Q96A23 557 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 SDCCAG3Q96C92 435 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 NMD3Q96D46 503 aaKnown RBP4.87□□□□□ -1.63
ZEB1-220ENST00000560909 KIRREL1Q96J84 757 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 OXGR1Q96P68 337 aa4.87□□□□□ -1.63
ZEB1-220ENST00000560909 OR5B2Q96R09 309 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms