RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 UXS1Q8NBZ7 420 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 OR10D3Q8NH80 312 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TRMT10AQ8TBZ6 339 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ADAMTS14Q8WXS8 1223 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HSD17B8Q92506 261 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TTC9Q92623 222 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TMIGD2Q96BF3 282 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 GIMAP5Q96F15 307 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 LAT2Q9GZY6 243 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 WDR54Q9H977 334 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TP53TG5Q9Y2B4 290 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF462Q96JM2 2506 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 FER1L5A0AVI2 2057 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HELZP42694 1942 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 DENND4CQ5VZ89 1909 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SONP18583 2426 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TRBV5-3A0A0A0MS03 114 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TRBV2A0A0J9YWF9 115 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 IMPA2O14732 288 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SNPHO15079 494 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 EFSO43281 561 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MPZL2O60487 215 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SELENOFO60613 162 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 LYZL6O75951 148 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HCKP08631 526 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HTR1AP08908 422 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 CCL2P13500 99 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF20P17024 532 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SOX6P35712 828 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 NBL1P41271 181 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 EIF1P41567 113 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HTR3AP46098 478 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 RGS6P49758 472 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HLCSP50747 726 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 NR1H2P55055 460 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 VBP1P61758 197 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SLC35A1P78382 337 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MRPS15P82914 257 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 GLO1Q04760 184 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 CDK5R2Q13319 367 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SPATS1Q496A3 300 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 NADK2Q4G0N4 442 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 RBM48Q5RL73 367 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF613Q6PF04 617 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 PAQR6Q6TCH4 344 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 THSD4Q6ZMP0 1018 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 CCDC80Q76M96 950 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 CD163Q86VB7 1156 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 COMTD1Q86VU5 262 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 WFDC8Q8IUA0 241 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MISPQ8IVT2 679 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SLC7A6Q92536 515 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 KLHDC3Q9BQ90 382 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 B3GNT4Q9C0J1 378 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 COMMD4Q9H0A8 199 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HDHD2Q9H0R4 259 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TCF7L1Q9HCS4 588 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 COQ3Q9NZJ6 369 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ASH2LQ9UBL3 628 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 BOLA1Q9Y3E2 137 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TSC22D4Q9Y3Q8 395 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 A0A1B0GVC2 190 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 FITM1A5D6W6 292 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SLC22A20A6NK97 555 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ANXA2P2A6NMY6 339 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 FFAR1O14842 300 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 OR7A10O76100 309 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MAS1P04201 325 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SP1P08047 785 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 CD14P08571 375 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ITGA5P08648 1049 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 QDPRP09417 244 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HLA-DOBP13765 273 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HOXB6P17509 224 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HTR5AP47898 357 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 GABRA4P48169 554 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MLF1P58340 268 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF91Q05481 1191 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 COX10Q12887 443 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MFSD13AQ14CX5 517 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 MLC1Q15049 377 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ETFDHQ16134 617 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SPATA46Q5T0L3 261 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 IDNKQ5T6J7 187 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 P2RY8Q86VZ1 359 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF101Q8IZC7 436 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 TMEM251Q8N6I4 163 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SLC37A3Q8NCC5 494 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 FAM83FQ8NEG4 500 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 NUBPLQ8TB37 319 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 UFD1Q92890 307 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 APH1AQ96BI3 265 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 SARAFQ96BY9 339 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 C7orf34Q96L11 122 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HIST1H2AAQ96QV6 131 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 CNN2Q99439 309 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 ALG12Q9BV10 488 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 RTN4RQ9BZR6 473 aa4.92□□□□□ -1.62
VPS13C-209ENST00000560637 HINT3Q9NQE9 182 aaKnown RBP4.92□□□□□ -1.62
VPS13C-209ENST00000560637 UBAP1Q9NZ09 502 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms