RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DANCRP0C864 163 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 HLA-DOBP13765 273 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 PTNP21246 168 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 PAX7P23759 505 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 OR1E2P47887 323 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 GSK3BP49841 420 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 SH3BGRP55822 239 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 SLC25A3Q00325 362 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 ZP4Q12836 540 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 PMS2P3Q13401 168 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 KLHL17Q6TDP4 642 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 TMEM108Q6UXF1 575 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 OR1K1Q8NGR3 316 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 GRIP2Q9C0E4 1043 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 MEPEQ9NQ76 525 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 RIMS3Q9UJD0 308 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 ZNF229Q9UJW7 825 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 MGAT4BQ9UQ53 548 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 LAMP3Q9UQV4 416 aa13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 MAGED1Q9Y5V3 778 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-210ENST00000560383 A0A1W2PR80 420 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 CXCR6O00574 342 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 SMAD7O15105 426 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 CH25HO95992 272 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 CD40P25942 277 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 TAS2R41P59536 307 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 PRPS1P60891 318 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 PSME3P61289 254 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 PIN1Q13526 163 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 DEF8Q6ZN54 512 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 CBLL1Q75N03 491 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 NKAIN4Q8IVV8 208 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 PIK3C3Q8NEB9 887 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 LIPHQ8WWY8 451 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 LZICQ8WZA0 190 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 BCL2L2Q92843 193 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 LRR1Q96L50 414 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 NELFAQ9H3P2 528 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 NANSQ9NR45 359 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 TAS2R5Q9NYW4 299 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 ARL2BPQ9Y2Y0 163 aa13.27□□□□□ -0.29
SNRPA1-210ENST00000560383 ARPC4-TTLL3A0A0A6YYG9 625 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 ABCD4O14678 606 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 SHOX2O60902 331 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 MT-ND1P03886 318 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 SOD3P08294 240 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF83P51522 516 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 POU3F1Q03052 451 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 HIKESHIQ53FT3 197 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 HMBOX1Q6NT76 420 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 ANKRD16Q6P6B7 361 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 SLC46A3Q7Z3Q1 461 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 C20orf196Q8IYI0 205 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 GPR137CQ8N3F9 429 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 ANKS4BQ8N8V4 417 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 SMAP2Q8WU79 429 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 NEUROG1Q92886 237 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 TXNDC15Q96J42 360 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 TPD52L3Q96J77 140 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 PRRC1Q96M27 445 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 HS6ST2Q96MM7 605 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 GPR35Q9HC97 309 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 SPAG4Q9NPE6 437 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 A4GNTQ9UNA3 340 aa13.26□□□□□ -0.29
SNRPA1-210ENST00000560383 SLC35F4A4IF30 521 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 HTR3EA5X5Y0 456 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 WNT11O96014 354 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 TSPAN19P0C672 248 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 CDH2P19022 906 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 AHCYP23526 432 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 UGT2B15P54855 530 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 IL1RL1Q01638 556 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 FXNQ16595 210 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 PGGHGQ32M88 737 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 KLHL24Q6TFL4 600 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF627Q7L945 461 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 VTCN1Q7Z7D3 282 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 DTX2Q86UW9 622 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 WDFY1Q8IWB7 410 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 FAM169BQ8N8A8 192 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 TMEM255BQ8WV15 326 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 TMEM239Q8WW34 195 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 ZNF837Q96EG3 531 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 LRRC37BQ96QE4 947 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 KCTD14Q9BQ13 255 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 EMC6Q9BV81 110 aa13.25□□□□□ -0.29
SNRPA1-210ENST00000560383 FAIMQ9NVQ4 179 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms