RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 STACQ99469 402 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 PRAMEF27A3QJZ7 478 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 GPRIN2O60269 458 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 GCAP28676 217 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 NOVA1P51513 510 aaKnown RBP12.43□□□□□ -0.42
TRAF3-208ENST00000560371 GABREP78334 506 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 MSMO1Q15800 293 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 PRAMEF9Q5VWM5 478 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 RPL22L1Q6P5R6 122 aaKnown RBP12.43□□□□□ -0.42
TRAF3-208ENST00000560371 YRDCQ86U90 279 aaKnown RBP12.43□□□□□ -0.42
TRAF3-208ENST00000560371 KIF18BQ86Y91 864 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 PHC2Q8IXK0 858 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 TSNAXQ99598 290 aaKnown RBP12.43□□□□□ -0.42
TRAF3-208ENST00000560371 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
TRAF3-208ENST00000560371 ACKR4Q9NPB9 350 aa12.43□□□□□ -0.42
TRAF3-208ENST00000560371 H0YIG0 161 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 GAPDHSO14556 408 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 RAB40ALP0C0E4 278 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 TAS2R46P59540 309 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 SYT13Q7L8C5 426 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 RAB40AQ8WXH6 277 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 TMEM59Q9BXS4 323 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 LMO7DNF2Z398 122 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 SYT5O00445 386 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 SEC14L2O76054 403 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 BDKRB2P30411 391 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 MLLT11Q13015 90 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 C6orf183Q5T699 404 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 H1FNTQ75WM6 255 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 CMIPQ8IY22 773 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 ZFAND1Q8TCF1 268 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 NMNAT3Q96T66 252 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 LYRM1O43325 122 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 IFNA4P05014 189 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 IGFBP6P24592 240 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 CCL4L1Q8NHW4 92 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 THAP7Q9BT49 309 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 CHRNA9Q9UGM1 479 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 LOXL2Q9Y4K0 774 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 OR51B4Q9Y5P0 310 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 DSCR3O14972 297 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 SSX4O60224 188 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 NSA2O95478 260 aaKnown RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 IGLV3-27P01718 113 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 LRRC28Q86X40 367 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 ACBD4Q8NC06 268 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 BCL7CQ8WUZ0 217 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 NIPAL2Q9H841 368 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 ZNF355PQ9NSJ1 428 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 A0A1W2PQ09 198 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 RNF212BA8MTL3 300 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 MT-ATP6P00846 226 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 SLC1A3P43003 542 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 ESPNLQ6ZVH7 1005 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 OR4M1Q8NGD0 313 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 OR4D6Q8NGJ1 314 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 LTB4R2Q9NPC1 389 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 DUSP22Q9NRW4 184 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 ZNF91Q05481 1191 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 RIPPLY1Q0D2K3 151 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 HYAL4Q2M3T9 481 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 GTPBP8Q8N3Z3 284 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-208ENST00000560371 NT5DC2Q9H857 520 aa12.42□□□□□ -0.42
TRAF3-208ENST00000560371 A0A1W2PPH5 198 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TFP02787 698 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 T-ENOLP0DO92 83 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 APOBEC1P41238 236 aaKnown RBP12.41□□□□□ -0.42
TRAF3-208ENST00000560371 P2RX1P51575 399 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 DEFB109BQ30KR1 87 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TMEM71Q6P5X7 295 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 LINC00346Q8IVM7 164 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 NDNFQ8TB73 568 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 SGK3Q96BR1 496 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 MS4A6EQ96DS6 147 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 SNX18Q96RF0 628 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 LYSMD1Q96S90 227 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 DEFB127Q9H1M4 99 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 UBFD1O14562 309 aaKnown RBP12.41□□□□□ -0.42
TRAF3-208ENST00000560371 KLK10O43240 276 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 CCR2P41597 374 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 DUSP5Q16690 384 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 GLB1L2Q8IW92 636 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 SPARTQ8N0X7 666 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 LILRA2Q8N149 483 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 DMBX1Q8NFW5 382 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 WBP2Q969T9 261 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 MIB2Q96AX9 1013 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 TUBG2Q9NRH3 451 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 FER1L5A0AVI2 2057 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 PGFP49763 221 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
TRAF3-208ENST00000560371 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms