RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PRAMEF11O60813 436 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 ATP1B3P54709 279 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 OR4E2Q8NGC2 313 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 PPP1R1CQ8WVI7 109 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 SEC22AQ96IW7 307 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 MARCH2Q9P0N8 246 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 KPTNQ9Y664 436 aa17.56■□□□□ 0.4
SEMA4B-215ENST00000560089 SEC14L6B5MCN3 397 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 C9JQL5 133 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 AGPAT2O15120 278 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 CYTIPO60759 359 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 TBX4P57082 545 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 TWF1Q12792 350 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 RNASE10Q5GAN6 216 aaKnown RBP17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 ARHGAP40Q5TG30 622 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 NRROSQ86YC3 692 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 C19orf47Q8N9M1 422 aaKnown RBP17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 OR5M8Q8NGP6 311 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 WFIKKN2Q8TEU8 576 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 AMDHD1Q96NU7 426 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 NDUFAF3Q9BU61 184 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 C20orf24Q9BUV8 137 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 SOX15O60248 233 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 GPR37L1O60883 481 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 ARL6IP5O75915 188 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 RGRP47804 291 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 TAS2R43P59537 309 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 PPP1R3BQ86XI6 285 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 PRSS58Q8IYP2 241 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 SLC30A7Q8NEW0 376 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 SYNPRQ8TBG9 265 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 C4orf36Q96KX1 117 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 POFUT1Q9H488 388 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 HINT3Q9NQE9 182 aaKnown RBP17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 LPAR3Q9UBY5 353 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 YIPF1Q9Y548 306 aa17.55■□□□□ 0.4
SEMA4B-215ENST00000560089 MAN2B1O00754 1011 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 ADAM10O14672 748 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 AK1P00568 194 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 LINC00271P0C7V0 271 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 FAM157CP0CG43 387 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 OR8G3PP0DMU2 310 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 MC1RQ01726 317 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 SCGB2B2Q4G0G5 96 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 PDZD11Q5EBL8 140 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 NDUFAF7Q7L592 441 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 LRRC18Q8N456 261 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 POC1BQ8TC44 478 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 SKA2Q8WVK7 121 aaPredicted RBP17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 MYEOVQ96EZ4 313 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 TRANK1O15050 2925 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 A8MWP6 167 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 KCNAB3O43448 404 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 PRICKLE3O43900 615 aaPredicted RBP17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 CD22P20273 847 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 CDK2P24941 298 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 RPS10P46783 165 aaKnown RBP17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 PRRT3Q5FWE3 981 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 FAM151BQ6UXP7 276 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 CERS6Q6ZMG9 384 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 ZNF574Q6ZN55 896 aaPredicted RBP17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 IGSF8Q969P0 613 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 KIRREL1Q96J84 757 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 MYOZ1Q9NP98 299 aaPredicted RBP17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 GREB1Q4ZG55 1949 aa17.54■□□□□ 0.4
SEMA4B-215ENST00000560089 CCSO14618 274 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 PMS2P2O95744 297 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 CD5P06127 495 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 CD14P08571 375 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 IRF1P10914 325 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 EPCAMP16422 314 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 CLDN12P56749 244 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 RAC1P63000 192 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 OR2A2Q6IF42 318 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 ZNF683Q8IZ20 524 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 CCDC107Q8WV48 283 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 RAB8BQ92930 207 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 FAM46AQ96IP4 442 aaKnown RBP17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 SELENOIQ9C0D9 397 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 SEMA4GQ9NTN9 838 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 PLXNA4Q9HCM2 1894 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3DA0A087WVF3 549 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3IA0A087WXS9 549 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3EA0A087X179 549 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3KA0A087X1G2 549 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3FA6NER0 549 aaPredicted RBP17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3LB9A6J9 549 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 MAGEB4O15481 346 aaPredicted RBP17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 ABLIM3O94929 683 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 GBAP04062 536 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 OR4E1P0C645 316 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 HMGA1P17096 107 aaKnown RBP17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 OR1E1P30953 314 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TIA1P31483 386 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 STXBP1P61764 594 aaKnown RBP17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 NKPD1Q17RQ9 610 aa17.53■□□□□ 0.4
SEMA4B-215ENST00000560089 TBC1D3CQ6IPX1 549 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms