RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 TXNDC12O95881 172 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 PLGP00747 810 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 PDGFAP04085 211 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 CDK1P06493 297 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 MAGEA5P43359 124 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 STARP49675 285 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 GFRA1P56159 465 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 CLDN20P56880 219 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 CSNK2BP67870 215 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 EMX1Q04741 257 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 ST3GAL4Q11206 333 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 ZNF846Q147U1 533 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 TRIM16LQ309B1 348 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 MESTQ5EB52 335 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 ZNF766Q5HY98 468 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 MEDAGQ5VYS4 303 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 NXNL2Q5VZ03 156 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 GGNQ86UU5 652 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 GHDCQ8N2G8 530 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 TMEM251Q8N6I4 163 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 LSM14AQ8ND56 463 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 OR14L1PQ8NHC6 308 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 SLC25A43Q8WUT9 341 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 NMNAT3Q96T66 252 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 SMAD5Q99717 465 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 NAA50Q9GZZ1 169 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 ZNF346Q9UL40 294 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 KLF13Q9Y2Y9 288 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-209ENST00000559551 K7EM74 188 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 RGS10O43665 173 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 HIST1H2ABP04908 130 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 HPNP05981 417 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 GYPBP06028 91 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 APEHP13798 732 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 DIO1P49895 249 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 SUCLG1P53597 346 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 IRF3Q14653 427 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 HYAL4Q2M3T9 481 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 HIST3H2AQ7L7L0 130 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 PRSS48Q7RTY5 328 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 EXD3Q8N9H8 876 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 ZFP62Q8NB50 900 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 IPCEF1Q8WWN9 437 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 HIST1H2ACQ93077 130 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 LGALS12Q96DT0 336 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 Q96MT0 163 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 PIGQQ9BRB3 760 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 PRRG3Q9BZD7 231 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 CHST11Q9NPF2 352 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 J3QRK9 145 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 CD46P15529 392 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 RAC1P63000 192 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 ZP4Q12836 540 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 LINC00299Q6ZSB3 139 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 TMPPEQ6ZT21 453 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 H1FNTQ75WM6 255 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 TRILQ7L0X0 811 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 SHFQ7M4L6 423 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 SCAIQ8N9R8 606 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 ZNF519Q8TB69 540 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 FAR1Q8WVX9 515 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 SMPDL3BQ92485 455 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 ASPNQ9BXN1 380 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 NMNAT2Q9BZQ4 307 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 WDR12Q9GZL7 423 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 CCDC90BQ9GZT6 254 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 MRPS18AQ9NVS2 196 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 CNOT2Q9NZN8 540 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 PCDHGB1Q9Y5G3 927 aa12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 SPIN1Q9Y657 262 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-209ENST00000559551 PHF3Q92576 2039 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 RIIAD1A6NNX1 92 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 H7C1C5 153 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 IDH3BO43837 385 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 SERPINI2O75830 405 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 WISP2O76076 250 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 ITGB2P05107 769 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 AHCYP23526 432 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 SDHAP31040 664 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 CDH11P55287 796 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 LCN6P62502 163 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 PMP22Q01453 160 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 TLE3Q04726 772 aa12.8□□□□□ -0.36
RABGGTA-209ENST00000559551 RUNX1T1Q06455 604 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms