RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 FAM162AQ96A26 154 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 CMTM5Q96DZ9 223 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 TXNDC15Q96J42 360 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 C18orf12Q96KH6 178 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 HS6ST2Q96MM7 605 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 HOPXQ9BPY8 73 aaPredicted RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 ULBP2Q9BZM5 246 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 PCDHAC1Q9H158 963 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 HEATR1Q9H583 2144 aaKnown RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 CRLF2Q9HC73 371 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 GPR35Q9HC97 309 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 OBP2BQ9NPH6 170 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 ADA2Q9NZK5 511 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 RIMS3Q9UJD0 308 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 FLNAP21333 2647 aaKnown RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 ARID1AO14497 2285 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 CADP27708 2225 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 IGHV1-18A0A0C4DH31 117 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 LOC102725191A0A1B0GVB3 256 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 GMNCA6NCL1 334 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TRIM64A6NGJ6 449 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TRIM64BA6NI03 449 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 MCIDASD6RGH6 385 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 ATP6V1G2-DDX39BF2Z307 99 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 BLOC1S5-TXNDC5H3BN57 136 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 H7C1Q1 480 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 NDUFAB1O14561 156 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 SNX3O60493 162 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TMCC2O75069 709 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 FZD7O75084 574 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 LYPD3O95274 346 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 MT-ND1P03886 318 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 IFNW1P05000 195 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 DANCRP0C864 163 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 IFNGR1P15260 489 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 NCK1P16333 377 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 DRD4P21917 467 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 YAP1P46937 504 aaKnown RBP7.16□□□□□ -1.26
SNX1-207ENST00000559401 CSNK1A1P48729 337 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 GSK3BP49841 420 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 FABP6P51161 128 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 UGT2B15P54855 530 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 BIDP55957 195 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 PSME3P61289 254 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 MXRA7P84157 204 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 NPRL3Q12980 569 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 MELKQ14680 651 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 AGAP6Q5VW22 663 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 B3GLCTQ6Y288 498 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 ZNF813Q6ZN06 617 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 FKBP9P1Q75LS8 142 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 SLC35D2Q76EJ3 337 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 PXKQ7Z7A4 578 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 VTCN1Q7Z7D3 282 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 KRTAP1-3Q8IUG1 177 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 NKAIN4Q8IVV8 208 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TMEM123Q8N131 208 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 LRRC17Q8N6Y2 441 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 ANKK1Q8NFD2 765 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 PFN4Q8NHR9 129 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TMEM255BQ8WV15 326 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TMEM239Q8WW34 195 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 BCL2L2Q92843 193 aaPredicted RBP7.16□□□□□ -1.26
SNX1-207ENST00000559401 SGTBQ96EQ0 304 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 SLC38A2Q96QD8 506 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 KCTD14Q9BQ13 255 aaPredicted RBP7.16□□□□□ -1.26
SNX1-207ENST00000559401 PRSS27Q9BQR3 290 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 BDH2Q9BUT1 245 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 TRAF4Q9BUZ4 470 aaPredicted RBP7.16□□□□□ -1.26
SNX1-207ENST00000559401 SLC19A3Q9BZV2 496 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 POLR2J2Q9GZM3 115 aaKnown RBP7.16□□□□□ -1.26
SNX1-207ENST00000559401 POLR2J3Q9H1A7 115 aaKnown RBP7.16□□□□□ -1.26
SNX1-207ENST00000559401 RHCGQ9UBD6 479 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 ZNF229Q9UJW7 825 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 MOKQ9UQ07 419 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 POFUT2Q9Y2G5 429 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 MED31Q9Y3C7 131 aa7.16□□□□□ -1.26
SNX1-207ENST00000559401 ARPC4-TTLL3A0A0A6YYG9 625 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 A0A1W2PRG6 482 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 ZNF99A8MXY4 864 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 E7EQL1 145 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 RPL36A-HNRNPH2H7BZ11 118 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 PIP5K1CO60331 668 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 GMNNO75496 209 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 SERPINA1P01009 418 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 CRYAAP02489 173 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 F13BP05160 661 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 INHBBP09529 407 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 CD79AP11912 226 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 IFI30P13284 250 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 B4GALT1P15291 398 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 FOSL1P15407 271 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 FUT1P19526 365 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 TTKP33981 857 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 RBM34P42696 430 aaKnown RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 IDH3GP51553 393 aaPredicted RBP7.15□□□□□ -1.26
SNX1-207ENST00000559401 RIPPLY3P57055 190 aa7.15□□□□□ -1.26
SNX1-207ENST00000559401 SELENOWP63302 87 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms