RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MALT1Q9UDY8 824 aa19.18■□□□□ 0.66
SNX1-206ENST00000559389 FOXD3Q9UJU5 478 aaPredicted RBP19.18■□□□□ 0.66
SNX1-206ENST00000559389 CACNA1CQ13936 2221 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 TENM4Q6N022 2769 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 A1L4Q6 167 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 CNOT4O95628 575 aaKnown RBP19.17■□□□□ 0.66
SNX1-206ENST00000559389 IFNGR1P15260 489 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 PCYT1AP49585 367 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 FXYD6P3P58550 94 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 PRPS1P60891 318 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 HMBOX1Q6NT76 420 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 SHQ1Q6PI26 577 aaKnown RBP19.17■□□□□ 0.66
SNX1-206ENST00000559389 BEND4Q6ZU67 534 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 SLC35D2Q76EJ3 337 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 TMEM123Q8N131 208 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 GABRG1Q8N1C3 465 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 FANK1Q8TC84 345 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 LRTOMTQ8WZ04 291 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 LRRC46Q96FV0 321 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 TXNDC15Q96J42 360 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 PSMG3-AS1Q96PY0 264 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 DGCR6LQ9BY27 220 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 NDEL1Q9GZM8 345 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 SLCO5A1Q9H2Y9 848 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 MGAT4BQ9UQ53 548 aa19.17■□□□□ 0.66
SNX1-206ENST00000559389 PTP4A3O75365 173 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 NDUFB2O95178 105 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 ADAP00813 363 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 GASTP01350 101 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 IGHMP01871 453 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 GRNP28799 593 aaKnown RBP19.16■□□□□ 0.66
SNX1-206ENST00000559389 MELKQ14680 651 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 TSPO2Q5TGU0 170 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 FBXW9Q5XUX1 488 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 ZNF620Q6ZNG0 422 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 Q6ZT83 130 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 IGFN1Q86VF2 1251 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 WDFY1Q8IWB7 410 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 HS3ST5Q8IZT8 346 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 NRBF2Q96F24 287 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 ADAD1Q96M93 576 aaKnown RBP19.16■□□□□ 0.66
SNX1-206ENST00000559389 GPX7Q96SL4 187 aaPredicted RBP19.16■□□□□ 0.66
SNX1-206ENST00000559389 BDH2Q9BUT1 245 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 EMC6Q9BV81 110 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 SLC7A10Q9NS82 523 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 ELOVL5Q9NYP7 299 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 PDP1Q9P0J1 537 aaPredicted RBP19.16■□□□□ 0.66
SNX1-206ENST00000559389 HCFC1P51610 2035 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 FLNCQ14315 2725 aa19.16■□□□□ 0.66
SNX1-206ENST00000559389 FASNP49327 2511 aaKnown RBP19.15■□□□□ 0.66
SNX1-206ENST00000559389 A0A1W2PRG6 482 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 SLC35F4A4IF30 521 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 MCIDASD6RGH6 385 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 PRSS44E7EML9 344 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 C19orf84I3L1E1 186 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 IGHV3-9P01782 118 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 COX5AP20674 150 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 CCKARP32238 428 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 CD79BP40259 229 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 DAP3P51398 398 aaKnown RBP19.15■□□□□ 0.66
SNX1-206ENST00000559389 BIDP55957 195 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 ACKR1Q16570 336 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 THSD4Q6ZMP0 1018 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 AMIGO2Q86SJ2 522 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 POMGNT2Q8NAT1 580 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 OR6X1Q8NH79 312 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 OR5K1Q8NHB7 308 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 ASB10Q8WXI3 467 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 GTPBP3Q969Y2 492 aaKnown RBP19.15■□□□□ 0.66
SNX1-206ENST00000559389 FEVQ99581 238 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 LINC00470Q9BZP3 86 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 S100A14Q9HCY8 104 aa19.15■□□□□ 0.66
SNX1-206ENST00000559389 OR6C65A6NJZ3 312 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 SLC43A1O75387 559 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 BCL10O95999 233 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 POU2F1P14859 743 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 CTXN1P60606 82 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 SORDQ00796 357 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 TAF11Q15544 211 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 ARMC4Q5T2S8 1044 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 SMARCD3Q6STE5 483 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 HDDC2Q7Z4H3 204 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 ALKBH3Q96Q83 286 aaPredicted RBP19.14■□□□□ 0.65
SNX1-206ENST00000559389 PKP2Q99959 881 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 NIPSNAP1Q9BPW8 284 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 KATNB1Q9BVA0 655 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 POLDIP3Q9BY77 421 aaKnown RBP19.14■□□□□ 0.65
SNX1-206ENST00000559389 OR52D1Q9H346 318 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 TXNIPQ9H3M7 391 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 CDH10Q9Y6N8 788 aa19.14■□□□□ 0.65
SNX1-206ENST00000559389 GCN1Q92616 2671 aaKnown RBP19.14■□□□□ 0.65
SNX1-206ENST00000559389 UPK3AO75631 287 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 CD14P08571 375 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 IGFBP2P18065 325 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 GSTM3P21266 225 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 RPL4P36578 427 aaKnown RBP19.13■□□□□ 0.65
SNX1-206ENST00000559389 ARHGDIAP52565 204 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 LGALS3BPQ08380 585 aa19.13■□□□□ 0.65
SNX1-206ENST00000559389 TOP3AQ13472 1001 aaPredicted RBP19.13■□□□□ 0.65
SNX1-206ENST00000559389 P2RY6Q15077 328 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms