RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 GPR35Q9HC97 309 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 OBP2BQ9NPH6 170 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 FAIMQ9NVQ4 179 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 MED29Q9NX70 200 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 CISD1Q9NZ45 108 aaKnown RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 NOX1Q9Y5S8 564 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 SHOX2O60902 331 aaPredicted RBP9.56□□□□□ -0.88
SPG11-216ENST00000559347 SERPINI2O75830 405 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 OR5F1O95221 314 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 CH25HO95992 272 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 IFNA14P01570 189 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 ADORA3P0DMS8 318 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 DRD4P21917 467 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 KDELR2P33947 212 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 CDKN1AP38936 164 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 OR1E2P47887 323 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 NUDT2P50583 147 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 UGT2B15P54855 530 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 RIPPLY3P57055 190 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 TAS2R41P59536 307 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 PRPS1P60891 318 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPG11-216ENST00000559347 LIPEQ05469 1076 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 CEACAM16Q2WEN9 425 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 PHYHD1Q5SRE7 291 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 ANKRD16Q6P6B7 361 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 SLC22A25Q6T423 547 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 SLC46A3Q7Z3Q1 461 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 PXKQ7Z7A4 578 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 NKAIN4Q8IVV8 208 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 BCL2L2Q92843 193 aaPredicted RBP9.56□□□□□ -0.88
SPG11-216ENST00000559347 ZNF837Q96EG3 531 aaPredicted RBP9.56□□□□□ -0.88
SPG11-216ENST00000559347 C18orf12Q96KH6 178 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 COX4I2Q96KJ9 171 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 EMC6Q9BV81 110 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 GRIP2Q9C0E4 1043 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 ALG2Q9H553 416 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 CRLF2Q9HC73 371 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 MEPEQ9NQ76 525 aaPredicted RBP9.56□□□□□ -0.88
SPG11-216ENST00000559347 NANSQ9NR45 359 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 ABCD2Q9UBJ2 740 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 ZNF229Q9UJW7 825 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 POU2F3Q9UKI9 436 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 AP3M1Q9Y2T2 418 aa9.56□□□□□ -0.88
SPG11-216ENST00000559347 A0A096LPE4 126 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 IGHV1-18A0A0C4DH31 117 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 A0A1W2PPZ6 126 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 E7EQL1 145 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 C11orf98E9PRG8 122 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ATP6V1G2-DDX39BF2Z307 99 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 SNX3O60493 162 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 SEC14L2O76054 403 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 CD8AP01732 235 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 MT-ND1P03886 318 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ASAH2BP0C7U1 165 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 AHCYP23526 432 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 RBM34P42696 430 aaKnown RBP9.55□□□□□ -0.88
SPG11-216ENST00000559347 GSK3BP49841 420 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ATP5J2P56134 94 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 UBE2NP61088 152 aaKnown RBP9.55□□□□□ -0.88
SPG11-216ENST00000559347 SELENOWP63302 87 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TUBA1BP68363 451 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TUBA4AP68366 448 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ARF1P84077 181 aaKnown RBP9.55□□□□□ -0.88
SPG11-216ENST00000559347 PIN1Q13526 163 aaPredicted RBP9.55□□□□□ -0.88
SPG11-216ENST00000559347 CARD17Q5XLA6 110 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 C11orf71Q6IPW1 123 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TUBA1AQ71U36 451 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 NANOGNBQ7Z5D8 188 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 C20orf196Q8IYI0 205 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 LRRC17Q8N6Y2 441 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 PFN4Q8NHR9 129 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TMEM255BQ8WV15 326 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TXNDC15Q96J42 360 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TPD52L3Q96J77 140 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 LRR1Q96L50 414 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 PRRC1Q96M27 445 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 SLC38A2Q96QD8 506 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 DHRS9Q9BPW9 319 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 HOPXQ9BPY8 73 aaPredicted RBP9.55□□□□□ -0.88
SPG11-216ENST00000559347 EFCAB1Q9HAE3 211 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 TAS2R5Q9NYW4 299 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 CRNNQ9UBG3 495 aaPredicted RBP9.55□□□□□ -0.88
SPG11-216ENST00000559347 RIMS3Q9UJD0 308 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ARFGEF3Q5TH69 2177 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ALPK2Q86TB3 2170 aa9.55□□□□□ -0.88
SPG11-216ENST00000559347 ZNF503-AS2A6NEH8 195 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 TRIM64A6NGJ6 449 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 TRIM64BA6NI03 449 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 ZNF99A8MXY4 864 aaPredicted RBP9.54□□□□□ -0.88
SPG11-216ENST00000559347 H7C1Q1 480 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 M0R3G1 203 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 CXCR6O00574 342 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 PIP5K1CO60331 668 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 IGF2P01344 180 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 IGKV3-15P01624 115 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 IGLV1-44P01699 117 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 INHBBP09529 407 aa9.54□□□□□ -0.88
SPG11-216ENST00000559347 THRBP10828 461 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms