RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 MS4A18Q3C1V0 323 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 C4orf17Q53FE4 359 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 CLEC12AQ5QGZ9 265 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 OGFRL1Q5TC84 451 aaPredicted RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 FAM205BPQ63HN1 556 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 LPCAT4Q643R3 524 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 KDM4DQ6B0I6 523 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 DPY19L2P2Q6ZN68 376 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 CREB3L2Q70SY1 520 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC35D2Q76EJ3 337 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 FAM214BQ7L5A3 538 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 AAED1Q7RTV5 226 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 IGFN1Q86VF2 1251 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 KIF18BQ86Y91 864 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 TUSC5Q8IXB3 177 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ZNF100Q8IYN0 542 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PARP8Q8N3A8 854 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 GALNT4Q8N4A0 578 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PACRGLQ8N7B6 248 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 CLDN22Q8N7P3 220 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 OR2T33Q8NG76 320 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 RND1Q92730 232 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ZNF775Q96BV0 537 aaPredicted RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ADAD1Q96M93 576 aaKnown RBP5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 ZNF570Q96NI8 536 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 DMRTA2Q96SC8 542 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 KATNB1Q9BVA0 655 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 TSSK6Q9BXA6 273 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 TEX12Q9BXU0 123 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PRRG3Q9BZD7 231 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PLA2G12AQ9BZM1 189 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 TXNIPQ9H3M7 391 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 RIBC2Q9H4K1 309 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 BCO1Q9HAY6 547 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 FANCFQ9NPI8 374 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 MED29Q9NX70 200 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 B3GAT1Q9P2W7 334 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 GRHPRQ9UBQ7 328 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 PROCRQ9UNN8 238 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 FLVCR1Q9Y5Y0 555 aa5.87□□□□□ -1.47
CHRNA3-204ENST00000559002 HELZ2Q9BYK8 2649 aaKnown RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 A6NIZ1 184 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NPIPB13A6NJU9 1138 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 OR6C65A6NJZ3 312 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NPIPB4C9JG80 1138 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 DVL2O14641 736 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC43A1O75387 559 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 SMNDC1O75940 238 aaKnown RBP eCLIP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 KRT33AO76009 404 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 TOXO94900 526 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 IGHG1P01857 330 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 IGHMP01871 453 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CD14P08571 375 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 IGFBP1P08833 259 aaPredicted RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 TSPAN19P0C672 248 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NR2C1P13056 603 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CTSSP25774 331 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CEACAM8P31997 349 aaPredicted RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 OPRM1P35372 400 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 ACVR1BP36896 505 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 SMSP52788 366 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CRISP1P54107 249 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 BIDP55957 195 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CLRN1P58418 232 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 FXYD6P3P58550 94 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 RAP1BP61224 184 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 RPL27P61353 136 aaKnown RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 ESRRGP62508 458 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 RAP1AP62834 184 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 ERVK-25P63136 954 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 FHL1Q13642 323 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 GINS1Q14691 196 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 ZIK1Q3SY52 487 aaPredicted RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CARD17Q5XLA6 110 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 FBXW10Q5XX13 1052 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 GPR139Q6DWJ6 353 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 SLC27A4Q6P1M0 643 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NIPAL3Q6P499 406 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 THSD4Q6ZMP0 1018 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 SEM1Q6ZVN7 128 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NCCRP1Q6ZVX7 275 aaPredicted RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NUFIP2Q7Z417 695 aaKnown RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 JAZF1Q86VZ6 243 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CCDC71Q8IV32 467 aaPredicted RBP5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 MARVELD2Q8N4S9 558 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 LRRC75AQ8NAA5 344 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 NAXEQ8NCW5 288 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 OR8D4Q8NGM9 314 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 OR6K3Q8NGY3 331 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 OR6N1Q8NGY5 312 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 ASB5Q8WWX0 329 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 ASB10Q8WXI3 467 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 TMEM45BQ96B21 275 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 APH1AQ96BI3 265 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 CCDC120Q96HB5 630 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 TXNDC15Q96J42 360 aa5.86□□□□□ -1.47
CHRNA3-204ENST00000559002 PLEKHA8Q96JA3 519 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms