RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MANSC1Q9H8J5 431 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 MTHFD2LQ9H903 347 aaPredicted RBP6.42□□□□□ -1.38
SPG11-213ENST00000558988 TPT1P8Q9HAU6 139 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 EXOSC3Q9NQT5 275 aaKnown RBP6.42□□□□□ -1.38
SPG11-213ENST00000558988 SLC7A10Q9NS82 523 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TAS2R16Q9NYV7 291 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 HAO1Q9UJM8 370 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 RAB21Q9UL25 225 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 ZNF443Q9Y2A4 671 aaPredicted RBP6.42□□□□□ -1.38
SPG11-213ENST00000558988 SLC9A8Q9Y2E8 581 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 FLVCR1Q9Y5Y0 555 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 ALPK2Q86TB3 2170 aa6.42□□□□□ -1.38
SPG11-213ENST00000558988 TRAV20A0A0B4J274 112 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 C5orf58C9J3I9 102 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 E7EQL1 145 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 ATP6V1G2-DDX39BF2Z307 99 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 UBDO15205 165 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 ZNF500O60304 480 aaPredicted RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 EIF1BO60739 113 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 SNNO75324 88 aaPredicted RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 CD8AP01732 235 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 IL6P05231 212 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 GPIP06744 558 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 ITGA5P08648 1049 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 RPS4Y1P22090 263 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 CD40P25942 277 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 GTF2E2P29084 291 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 SLC1A3P43003 542 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 POLR2JP52435 117 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 STX1BP61266 288 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 TUBA1BP68363 451 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 TUBA4AP68366 448 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 LARS2Q15031 903 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 PDK3Q15120 406 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 GABRA6Q16445 453 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 PDCD4Q53EL6 469 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 HIKESHIQ53FT3 197 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 TNFAIP8L3Q5GJ75 292 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 AGAP6Q5VW22 663 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 PRAMEF8Q5VWM4 474 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 PRAMEF7Q5VXH5 474 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 TMEM225Q6GV28 225 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 TUBA1AQ71U36 451 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 MAVSQ7Z434 540 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 SERPINA11Q86U17 422 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 P2RY8Q86VZ1 359 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 ZNF440Q8IYI8 595 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 FBXL14Q8N1E6 418 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 MIER2Q8N344 545 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 CLIP4Q8N3C7 705 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 GLB1L3Q8NCI6 653 aaPredicted RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 OR9K2Q8NGE7 335 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 SLC38A5Q8WUX1 472 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 PMM1Q92871 262 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 MAL2Q969L2 176 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 ADAD1Q96M93 576 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 ZNF385AQ96PM9 386 aaKnown RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 ALKBH3Q96Q83 286 aaPredicted RBP6.41□□□□□ -1.38
SPG11-213ENST00000558988 KCNS3Q9BQ31 491 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 RHNO1Q9BSD3 238 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 SPATA9Q9BWV2 254 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 NELFAQ9H3P2 528 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 CALML5Q9NZT1 146 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 RPS6KB2Q9UBS0 482 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 MALT1Q9UDY8 824 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 B3GALT5Q9Y2C3 310 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 SLC25A15Q9Y619 301 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 COX11Q9Y6N1 276 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 HIVEP2P31629 2446 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 TLN2Q9Y4G6 2542 aa6.41□□□□□ -1.38
SPG11-213ENST00000558988 MAP1AP78559 2803 aaPredicted RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 HEATR1Q9H583 2144 aaKnown RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 IGHV4-30-2A0A087WSY4 118 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 FAM234BA2RU67 622 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 CDHR4A6H8M9 788 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 LIPT2A6NK58 231 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 SLCO1B7G3V0H7 640 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ZNF208O43345 1280 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 DNPH1O43598 174 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 TMCC2O75069 709 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ERLIN1O75477 346 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 LY6HO94772 140 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 PGM3O95394 542 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 AHSA1O95433 338 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 LGI1O95970 557 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 PAX1P15863 534 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 FAHP16930 419 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 PTAFRP25105 342 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 AQP1P29972 269 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 ACAA2P42765 397 aaKnown RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 RPS5P46782 204 aaKnown RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 CLK1P49759 484 aaKnown RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 SLC16A1P53985 500 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 PRPS1P60891 318 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 UBE2NP61088 152 aaKnown RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 IRX1P78414 480 aaPredicted RBP6.4□□□□□ -1.38
SPG11-213ENST00000558988 TGFBR3Q03167 851 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 LRRC74AQ0VAA2 488 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 SLC17A1Q14916 467 aa6.4□□□□□ -1.38
SPG11-213ENST00000558988 RAB35Q15286 201 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms