RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TRAPPC13A5PLN9 417 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 HAX1O00165 279 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 NDUFS8O00217 210 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 CHP2O43745 196 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 KRT33AO76009 404 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 IGHV3-9P01782 118 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
RPL28-206ENST00000558752 SRD5A1P18405 259 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 CD247P20963 164 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPL28-206ENST00000558752 SF3A3Q12874 501 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■□□□ 13.6
RPL28-206ENST00000558752 C1DQ13901 141 aaKnown RBP13.35□□□□□ -0.27
RPL28-206ENST00000558752 GABRA6Q16445 453 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 TSPO2Q5TGU0 170 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 EPHX4Q8IUS5 362 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 ZNF525Q8N782 197 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 OR6T1Q8NGN1 323 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 RNF217Q8TC41 542 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 TAMM41Q96BW9 452 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 ZNF385AQ96PM9 386 aaKnown RBP13.35□□□□□ -0.27
RPL28-206ENST00000558752 PRR14Q9BWN1 585 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 ASPNQ9BXN1 380 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 LINC00470Q9BZP3 86 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 SLC19A3Q9BZV2 496 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 NSRP1Q9H0G5 558 aaKnown RBP13.35□□□□□ -0.27
RPL28-206ENST00000558752 MOV10Q9HCE1 1003 aaKnown RBP13.35□□□□□ -0.27
RPL28-206ENST00000558752 OBP2BQ9NPH6 170 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 RCE1Q9Y256 329 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
RPL28-206ENST00000558752 IGKV1D-42A0A075B6H8 117 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 A0A096LNT2 108 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 FAM220BPB1ANY3 271 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 AKAP8O43823 692 aaKnown RBP13.34□□□□□ -0.27
RPL28-206ENST00000558752 WNT11O96014 354 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 COX4I1P13073 169 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 KDELR2P33947 212 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 PDLIM4P50479 330 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 ENTPD8Q5MY95 495 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 FAM166AQ6J272 317 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 TTC33Q6PID6 262 aaPredicted RBP13.34□□□□□ -0.27
RPL28-206ENST00000558752 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 HACD2Q6Y1H2 254 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 OR2T12Q8NG77 320 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 C10orf105Q8TEF2 133 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 SLC41A3Q96GZ6 507 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 ELAC2Q9BQ52 826 aaKnown RBP13.34□□□□□ -0.27
RPL28-206ENST00000558752 MYOZ1Q9NP98 299 aaPredicted RBP13.34□□□□□ -0.27
RPL28-206ENST00000558752 MRPL39Q9NYK5 338 aaKnown RBP13.34□□□□□ -0.27
RPL28-206ENST00000558752 ARMCX1Q9P291 453 aa13.34□□□□□ -0.27
RPL28-206ENST00000558752 ELOVL7A1L3X0 281 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 GMNCA6NCL1 334 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 ZNF587BE7ETH6 402 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 M0R082 166 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 M0R3H8 397 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 OPN1SWP03999 348 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 ITGA5P08648 1049 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 GRPRP30550 384 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 IFNA8P32881 189 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 SH3BGRP55822 239 aaPredicted RBP13.33□□□□□ -0.28
RPL28-206ENST00000558752 PRPS1P60891 318 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 LIPNQ5VXI9 398 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 CPLX4Q7Z7G2 160 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 ZNF540Q8NDQ6 660 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 ZNF417Q8TAU3 575 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 ADAMTS16Q8TE57 1224 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 LZICQ8WZA0 190 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 RCN3Q96D15 328 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 ZNF587Q96SQ5 575 aaPredicted RBP13.33□□□□□ -0.28
RPL28-206ENST00000558752 WFDC6Q9BQY6 131 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 PIMREGQ9BSJ6 248 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 SLC17A5Q9NRA2 495 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 FBXO9Q9UK97 447 aaPredicted RBP13.33□□□□□ -0.28
RPL28-206ENST00000558752 NOX1Q9Y5S8 564 aa13.33□□□□□ -0.28
RPL28-206ENST00000558752 HTR3EA5X5Y0 456 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 MS4A18H0YCH9 400 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 SLC43A1O75387 559 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 ZNF432O94892 652 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 IGF2P01344 180 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 BGLAPP02818 100 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 THRBP10828 461 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 ZNF16P17020 682 aaPredicted RBP13.32□□□□□ -0.28
RPL28-206ENST00000558752 PRDX6P30041 224 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 SELENOWP63302 87 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 PMS2P3Q13401 168 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 NPTX1Q15818 432 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 MS4A18Q3C1V0 323 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 NIPAL3Q6P499 406 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 PXKQ7Z7A4 578 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 UEVLDQ8IX04 471 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 MICU2Q8IYU8 434 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 KDM8Q8N371 416 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 PIK3C3Q8NEB9 887 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 MAGEE2Q8TD90 523 aaPredicted RBP13.32□□□□□ -0.28
RPL28-206ENST00000558752 LRR1Q96L50 414 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 KCNS3Q9BQ31 491 aa13.32□□□□□ -0.28
RPL28-206ENST00000558752 HEATR1Q9H583 2144 aaKnown RBP13.32□□□□□ -0.28
RPL28-206ENST00000558752 B3GAT1Q9P2W7 334 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms