RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 TCRBV16S1A1N1A0A5B0 115 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 A8MV72 311 aaPredicted RBP6.61□□□□□ -1.35
VPS13C-206ENST00000558338 AIPO00170 330 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 SULT1B1O43704 296 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 SLC25A12O75746 678 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ECDO95905 644 aaPredicted RBP6.61□□□□□ -1.35
VPS13C-206ENST00000558338 AVPP01185 164 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 IGKV3-11P04433 115 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 RAB40ALP0C0E4 278 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 CALCBP10092 127 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ATF1P18846 271 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 AQP2P41181 271 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 RAD52P43351 418 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 RPS11P62280 158 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS13C-206ENST00000558338 GPLD1P80108 840 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 EGR3Q06889 387 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 DYRK1AQ13627 763 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 EFR3AQ14156 821 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 DEFB133Q30KQ1 61 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 FAM69AQ5T7M9 428 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 LRRN1Q6UXK5 716 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 TTLL10Q6ZVT0 673 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 PRSS42Q7Z5A4 293 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 RFLNBQ8N5W9 214 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 FAM160A2Q8N612 972 aaPredicted RBP6.61□□□□□ -1.35
VPS13C-206ENST00000558338 EXD3Q8N9H8 876 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 GATSQ8NAP1 163 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 OR51L1Q8NGJ5 315 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 OR13C5Q8NGS8 318 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ZFAND1Q8TCF1 268 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF721Q8TF20 911 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 RLN3Q8WXF3 142 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 RAB40AQ8WXH6 277 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ADIPOR1Q96A54 375 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 Q96M85 177 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 KLHL15Q96M94 604 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 OR14A2Q96R54 314 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 GON7Q9BXV9 100 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 OR8D2Q9GZM6 311 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ACTR6Q9GZN1 396 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ADAM19Q9H013 955 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 COMMD4Q9H0A8 199 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 COPS3Q9UNS2 423 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 TMEM184BQ9Y519 407 aaPredicted RBP6.61□□□□□ -1.35
VPS13C-206ENST00000558338 ETV7Q9Y603 341 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 SLCO1B1Q9Y6L6 691 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 THADAQ6YHU6 1953 aa6.61□□□□□ -1.35
VPS13C-206ENST00000558338 TDRD6O60522 2096 aaKnown RBP6.61□□□□□ -1.35
VPS13C-206ENST00000558338 C7orf66A4D0T2 115 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 NAP1L6A6NFF2 107 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 OR6C70A6NIJ9 312 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 XKRYO14609 159 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 NUDT21O43809 227 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 DDAH2O95865 285 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PAHP00439 452 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 RAF1P04049 648 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 GP1BBP13224 206 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SRMP19623 302 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CXCR1P25024 350 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 STOMP27105 288 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TACR3P29371 465 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CDKN2AP42771 156 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ID4P47928 161 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 RPL18Q07020 188 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 RIPPLY1Q0D2K3 151 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PLCXD2Q0VAA5 305 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 RASGEF1BQ0VAM2 473 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 FAPQ12884 760 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SRSF5Q13243 272 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TNK1Q13470 666 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ALKBH1Q13686 389 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CBFBQ13951 182 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 EBPQ15125 230 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 Q499Y3 187 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CEP78Q5JTW2 689 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF684Q5T5D7 378 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ASB18Q6ZVZ8 466 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 KRT74Q7RTS7 529 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CDC20BQ86Y33 519 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MISPQ8IVT2 679 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 D2HGDHQ8N465 521 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 YIPF7Q8N8F6 280 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 LGALS14Q8TCE9 139 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SMIM4Q8WVI0 70 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 YIPF5Q969M3 257 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ADAD1Q96M93 576 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 DERL3Q96Q80 235 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 FYTTD1Q96QD9 318 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 OR2M2Q96R28 347 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 GAL3ST4Q96RP7 486 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 LPAR4Q99677 370 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TMEM246Q9BRR3 403 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TTTY10Q9BZA0 68 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TBL1XR1Q9BZK7 514 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MED28Q9H204 178 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 WDR76Q9H967 626 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PLEKHA1Q9HB21 404 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF304Q9HCX3 659 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 NOX4Q9NPH5 578 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms