RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TRPV4Q9HBA0 871 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 MRPS30Q9NP92 439 aaKnown RBP4.65□□□□□ -1.67
HMG20A-204ENST00000558288 PRMT8Q9NR22 394 aaPredicted RBP4.65□□□□□ -1.67
HMG20A-204ENST00000558288 CMC2Q9NRP2 79 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 ZFP57Q9NU63 452 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 OR5V1Q9UGF6 321 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF443Q9Y2A4 671 aaPredicted RBP4.65□□□□□ -1.67
HMG20A-204ENST00000558288 SLC35A3Q9Y2D2 325 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 WDR45Q9Y484 360 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 YIPF1Q9Y548 306 aa4.65□□□□□ -1.67
HMG20A-204ENST00000558288 CACNA1EQ15878 2313 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 OTOGLQ3ZCN5 2332 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 DENND4AQ7Z401 1863 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 TMEM272A0A1B0GTI8 110 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 OR5H14A6NHG9 310 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MAN2B1O00754 1011 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ERI3O43414 337 aaKnown RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 SULT1B1O43704 296 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 TBX6O95947 436 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 RAB40ALP0C0E4 278 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CSNK2A2P19784 350 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MAPK3P27361 379 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MPIP34949 423 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 VIPR2P41587 438 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NPBWR1P48145 328 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ACTA2P62736 377 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ACTG2P63267 376 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 RBM39Q14498 530 aaKnown RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 STPG1Q5TH74 334 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PRAMEF17Q5VTA0 474 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PWWP2BQ6NUJ5 590 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MAMSTRQ6ZN01 415 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF704Q6ZNC4 412 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MOB3CQ70IA8 216 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NDUFAF7Q7L592 441 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 SLC36A1Q7Z2H8 476 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 FAM129CQ86XR2 697 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 SLC35F2Q8IXU6 374 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 LNX2Q8N448 690 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 FIBINQ8TAL6 211 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CYB5D2Q8WUJ1 264 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 RAB40AQ8WXH6 277 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CDS1Q92903 461 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CNTNAP3BQ96NU0 1288 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CNN2Q99439 309 aaKnown RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PITHD1Q9GZP4 211 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 WDR13Q9H1Z4 485 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 TSPAN10Q9H1Z9 355 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 KLHL31Q9H511 634 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CAPN10Q9HC96 672 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 APMAPQ9HDC9 416 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MKL2Q9ULH7 1088 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PPIL1Q9Y3C6 166 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 TRAV18A0A075B6X5 111 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 TRAV14DV4A0A0A6YYC5 116 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NPIPA5A0A0B4J1W7 369 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 TRAPPC13A5PLN9 417 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 OR6C76A6NM76 312 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 FAM171A2A8MVW0 826 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NPIPA7E9PJI5 369 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NEDD8-MDP1E9PL57 170 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 YKT6O15498 198 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF749O43361 778 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 EMC8O43402 210 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 KLF4O43474 513 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 BCL2L11O43521 198 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NDUFS6O75380 124 aaKnown RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CSF1P09603 554 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NPIPA8P0DM63 369 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 FRKP42685 505 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 GPR1P46091 355 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 NR0B1P51843 470 aaKnown RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 FXYD6P3P58550 94 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ST8SIA6P61647 398 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PPP2CBP62714 309 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PPP2CAP67775 309 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 DUSP2Q05923 314 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 LTBQ06643 244 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 IL10RAQ13651 578 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 OR7A5Q15622 319 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 RSPO4Q2I0M5 234 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 SCGB2B2Q4G0G5 96 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF805Q5CZA5 627 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 GLT8D1Q68CQ7 371 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 RPL22L1Q6P5R6 122 aaKnown RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 UQCC3Q6UW78 93 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 LCTLQ6UWM7 567 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF836Q6ZNA1 936 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 MTSS1LQ765P7 747 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 LRRTM1Q86UE6 522 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ARMC10Q8N2F6 343 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 INO80EQ8NBZ0 244 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 OR1J4Q8NGS1 313 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CCDC107Q8WV48 283 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 HAVCR1Q96D42 359 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CNRIP1Q96F85 164 aaPredicted RBP4.64□□□□□ -1.67
HMG20A-204ENST00000558288 HSPA12BQ96MM6 686 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF251Q9BRH9 671 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 PTDSS2Q9BVG9 487 aa4.64□□□□□ -1.67
HMG20A-204ENST00000558288 CPEB1Q9BZB8 566 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms