RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
SHMT2-230ENST00000557427 CCNJQ5T5M9 372 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 PGBD2Q6P3X8 592 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 VRK2Q86Y07 508 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 PEX5LQ8IYB4 626 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 ZNF619Q8N2I2 560 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 GATSQ8NAP1 163 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 OR2M3Q8NG83 312 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 OR4C3Q8NH37 302 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 SLC7A13Q8TCU3 470 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 RNF138Q8WVD3 245 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 C12orf43Q96C57 262 aaKnown RBP11.15□□□□□ -0.62
SHMT2-230ENST00000557427 MPP4Q96JB8 637 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 ZNF350Q9GZX5 532 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 EVA1AQ9H8M9 152 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 CALHM2Q9HA72 323 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 POLE3Q9NRF9 147 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 MAN2C1Q9NTJ4 1040 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 FKBP14Q9NWM8 211 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 ZNF226Q9NYT6 803 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-230ENST00000557427 CHST2Q9Y4C5 530 aa11.15□□□□□ -0.62
SHMT2-230ENST00000557427 TGP01266 2768 aa11.15□□□□□ -0.63
SHMT2-230ENST00000557427 AGAP5A6NIR3 686 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ZNF99A8MXY4 864 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 NOL3O60936 208 aaKnown RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 DBIP07108 87 aaKnown RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 POU2F1P14859 743 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 CPN1P15169 458 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 CHMP24386 653 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 RNF144AP50876 292 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 GFRA1P56159 465 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 C17orf67Q0P5P2 114 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 DCST2Q5T1A1 773 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 GPR107Q5VW38 600 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 SLX4IPQ5VYV7 408 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 C1orf94Q6P1W5 598 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ZAR1Q86SH2 424 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 UBQLNLQ8IYU4 475 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 FADS6Q8N9I5 356 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ZNF540Q8NDQ6 660 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 TOR1AIP2Q8NFQ8 470 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ZPLD1Q8TCW7 415 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ROBO4Q8WZ75 1007 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 UBE2FQ969M7 185 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 DTNBP1Q96EV8 351 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 SFXN3Q9BWM7 321 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 POLR2J2Q9GZM3 115 aaKnown RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 QRSL1Q9H0R6 528 aaKnown RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 POLR2J3Q9H1A7 115 aaKnown RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 PSORS1C1Q9UIG5 152 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 MRPS18CQ9Y3D5 142 aaKnown RBP11.14□□□□□ -0.63
SHMT2-230ENST00000557427 ZNF337Q9Y3M9 751 aa11.14□□□□□ -0.63
SHMT2-230ENST00000557427 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 H3BMQ9 156 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 AP3D1O14617 1153 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 NDUFB5O43674 189 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 KIAA0513O60268 411 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 GPRIN2O60269 458 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 FCMRO60667 390 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 STX11O75558 287 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 CYP7B1O75881 506 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 OR5F1O95221 314 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 HPGDP15428 266 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 GSTM3P21266 225 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 TBXA2RP21731 343 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 CCKARP32238 428 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 IFNGR2P38484 337 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 IDH2P48735 452 aaKnown RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 LHX2P50458 406 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 RGS8P57771 180 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 TAS2R41P59536 307 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 EEF1A1P68104 462 aaKnown RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 POU6F2P78424 691 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 PIGFQ07326 219 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 TRAM2Q15035 370 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 SYT6Q5T7P8 510 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 RAET1LQ5VY80 246 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 C12orf73Q69YU5 71 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 ZNF836Q6ZNA1 936 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 CHMP1BQ7LBR1 199 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 HMGN2P46Q86SG4 172 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 OR4K5Q8NGD3 323 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 TMEM171Q8WVE6 324 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 RORBQ92753 470 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 MYDGFQ969H8 173 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 INTS12Q96CB8 462 aaKnown RBP11.13□□□□□ -0.63
SHMT2-230ENST00000557427 ZG16BQ96DA0 208 aa11.13□□□□□ -0.63
SHMT2-230ENST00000557427 COG8Q96MW5 612 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms