RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 LDLRAD3Q86YD5 345 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 CNGA4Q8IV77 575 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 PPIL6Q8IXY8 311 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 IPCEF1Q8WWN9 437 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 PMM1Q92871 262 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 HES6Q96HZ4 224 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 DCLRE1CQ96SD1 692 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 CHID1Q9BWS9 393 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 SSBP3Q9BWW4 388 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 EQTNQ9NQ60 294 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 ACER3Q9NUN7 267 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 ERVK13-1Q9NX77 482 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 FBXL3Q9UKT7 428 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 FOXJ3Q9UPW0 622 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 CAB39Q9Y376 341 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 FAM96BQ9Y3D0 163 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 TNPO3Q9Y5L0 923 aaKnown RBP4.78□□□□□ -1.64
ATXN3-245ENST00000556958 GPR45Q9Y5Y3 372 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 CACNG2Q9Y698 323 aa4.78□□□□□ -1.64
ATXN3-245ENST00000556958 IGLV3-9A0A075B6K5 115 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 GNG14A0A1W2PPG7 69 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 RPL36A-HNRNPH2H7BZ11 118 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF264O43296 627 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 MFAP3LO75121 409 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 IGHV2-70P01814 119 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 SCG5P05408 212 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 UROSP10746 265 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 CD79AP11912 226 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF250P15622 560 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 STMN1P16949 149 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 MAKP20794 623 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 MAP3K8P41279 467 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 KIR2DS4P43632 304 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 GSTM5P46439 218 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 KCNJ1P48048 391 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF81P51508 661 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 EFNB2P52799 333 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 PRKAG1P54619 331 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ATP12AP54707 1039 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 FGF12P61328 243 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ROR2Q01974 943 aaKnown RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 PAX2Q02962 417 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 GTF2H2Q13888 395 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 C21orf62-AS1Q17RA5 79 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 GSG1Q2KHT4 349 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 SGO1Q5FBB7 561 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 STEAP4Q687X5 459 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZFAND6Q6FIF0 208 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 TMEM225Q6GV28 225 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 GTF2H2CQ6P1K8 395 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZCCHC12Q6PEW1 402 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 UNQ9370/PRO34162Q6UXP9 181 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ADAMTSL5Q6ZMM2 481 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 COMTD1Q86VU5 262 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 LYG1Q8N1E2 194 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 MUC20Q8N307 709 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 C1orf52Q8N6N3 182 aaKnown RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 KLHDC1Q8N7A1 406 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 COX18Q8N8Q8 333 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZIC4Q8N9L1 334 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 SPC24Q8NBT2 197 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 OR9K2Q8NGE7 335 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 OR2T6Q8NHC8 308 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 HOXB13Q92826 284 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 DDIT4LQ96D03 193 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF385AQ96PM9 386 aaKnown RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 LINC00470Q9BZP3 86 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 ALG9Q9H6U8 611 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 BRF2Q9HAW0 419 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 NMRAL1Q9HBL8 299 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 MBNL3Q9NUK0 354 aaKnown RBP4.77□□□□□ -1.65
ATXN3-245ENST00000556958 NSMCE4AQ9NXX6 385 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 TAS2R7Q9NYW3 318 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 VPS29Q9UBQ0 182 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 CHRNA9Q9UGM1 479 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 VPREB3Q9UKI3 123 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 DTNAQ9Y4J8 743 aa4.77□□□□□ -1.65
ATXN3-245ENST00000556958 PLSCR5A0PG75 271 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 AQP7P3A6NL99 342 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 F5H0A9 414 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 UBXN8O00124 270 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 CYP7B1O75881 506 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 RSL1D1O76021 490 aaKnown RBP4.76□□□□□ -1.65
ATXN3-245ENST00000556958 VAMP5O95183 116 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 RAB36O95755 333 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 CLIC3O95833 236 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 CLPTM1O96005 669 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 KRT14P02533 472 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 LIPFP07098 398 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 QDPRP09417 244 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 WNT2P09544 360 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 VSIG10L2P0DP72 767 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 UBL4AP11441 157 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 GFAPP14136 432 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 RAC2P15153 192 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 DDCP20711 480 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 EPHA3P29320 983 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 LIPAP38571 399 aa4.76□□□□□ -1.65
ATXN3-245ENST00000556958 CCNG1P51959 295 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms