RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CEACAM1P13688 526 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ETFAP13804 333 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ABOP16442 354 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 UGT2B7P16662 529 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 AKR1C4P17516 323 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ZBTB25P24278 435 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ITPKBP27987 946 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 EPHA3P29320 983 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 HOXC9P31274 260 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 GLP1RP43220 463 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 PNLIPRP2P54317 469 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 MFAP4P55083 255 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 UCP2P55851 309 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CLDN20P56880 219 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 FKBP3Q00688 224 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 ZFP36L1Q07352 338 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 ST3GAL1Q11201 340 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 OR5I1Q13606 314 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CDH18Q13634 790 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 IRF3Q14653 427 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 OPCMLQ14982 345 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 PCLAFQ15004 111 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 JOSD1Q15040 202 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 TSNQ15631 228 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 MAPK14Q16539 360 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 UBE2SQ16763 222 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 KCTD19Q17RG1 926 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 CR1LQ2VPA4 569 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ALKBH6Q3KRA9 238 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ADPRMQ3LIE5 342 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TMEM176BQ3YBM2 270 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 ASPRV1Q53RT3 343 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SAMD4BQ5PRF9 694 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 OTUD1Q5VV17 481 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 MBNL2Q5VZF2 373 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 NSUN5P2Q63ZY6 315 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 AWAT2Q6E213 333 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TBC1D3CQ6IPX1 549 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ADAM5Q6NVV9 412 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 INO80CQ6PI98 192 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 WDR74Q6RFH5 385 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 TEPPQ6URK8 271 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TMEM107Q6UX40 140 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ZDHHC24Q6UX98 284 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ZNF620Q6ZNG0 422 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 RBPMS2Q6ZRY4 209 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 TMUB2Q71RG4 321 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 C6orf120Q7Z4R8 191 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CILP2Q8IUL8 1156 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SERPINA12Q8IW75 414 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 DEFB107AQ8IZN7 70 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TBC1D3Q8IZP1 549 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 LRRC75A-AS1Q8N1F1 130 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 HORMAD2Q8N7B1 307 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SLC38A9Q8NBW4 561 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 OR14L1PQ8NHC6 308 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 RPLP0P6Q8NHW5 317 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 NFKBIDQ8NI38 313 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CASTOR1Q8WTX7 329 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 STYXQ8WUJ0 223 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TMEM239Q8WW34 195 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 HPSE2Q8WWQ2 592 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TMEM45BQ96B21 275 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 REEP6Q96HR9 211 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CPB2Q96IY4 423 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 THOC3Q96J01 351 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 PWWP2AQ96N64 755 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 WDFY2Q96P53 400 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 OR7D2Q96RA2 312 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CRAMP1Q96RY5 1269 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 REEP2Q9BRK0 252 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SEC11CQ9BY50 192 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 KATNBL1Q9H079 304 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 XYLT2Q9H1B5 865 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SYNPO2LQ9H987 977 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 BEX1Q9HBH7 125 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SGK2Q9HBY8 427 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 APMAPQ9HDC9 416 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ISYNA1Q9NPH2 558 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TM7SF3Q9NS93 570 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 FGF21Q9NSA1 209 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 SLC2A8Q9NY64 477 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 OR14J1Q9UGF5 321 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ING1Q9UK53 422 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 MRPS33Q9Y291 106 aaKnown RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 HS3ST3A1Q9Y663 406 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ASTN1O14525 1302 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 FER1L4A9Z1Z3 1794 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 PPLO60437 1756 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 TBC1D3EA0A087X179 549 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 VSTM2BA6NLU5 285 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 GFYI3L273 518 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 ANKRD28O15084 1053 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 YY2O15391 372 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 MAGEB4O15481 346 aaPredicted RBP5.65□□□□□ -1.5
TDP1-215ENST00000556498 TYROBPO43914 113 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 PDE6DO43924 150 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 PCDH7O60245 1069 aa5.65□□□□□ -1.5
TDP1-215ENST00000556498 FCMRO60667 390 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms