RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ERVK-25P63136 954 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF620Q6ZNG0 422 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 APH1AQ96BI3 265 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 SAMD8Q96LT4 415 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 KATNB1Q9BVA0 655 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 ADAM18Q9Y3Q7 739 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 DNAJC13O75165 2243 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 AKAP8O43823 692 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 KRT33AO76009 404 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 IL18BPO95998 194 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC6A6P31641 620 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 NTF4P34130 210 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 DAPP51397 102 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 DAP3P51398 398 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 FXYD6P3P58550 94 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 TRIP10Q15642 601 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 ACKR1Q16570 336 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 KLHL17Q6TDP4 642 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 RASSF6Q6ZTQ3 369 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 KIF18BQ86Y91 864 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 RELL2Q8NC24 303 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 OR52L1Q8NGH7 329 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 EME1Q96AY2 570 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 IFT27Q9BW83 186 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 DCLRE1BQ9H816 532 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 PAPOLBQ9NRJ5 636 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 KRT84Q9NSB2 600 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 RRP15Q9Y3B9 282 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 CDH10Q9Y6N8 788 aa12.45□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC35F4A4IF30 521 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 NKX2-6A6NCS4 301 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 PPP1R3DO95685 299 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 TSPAN19P0C672 248 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 CAMK2DQ13557 499 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 CDSNQ15517 529 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 LRRC36Q1X8D7 754 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 RFX4Q33E94 735 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC36A3Q495N2 470 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 FAHD1Q6P587 224 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 CBR4Q8N4T8 237 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 FAM26EQ8N5C1 309 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF610Q8N9Z0 462 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 LRRC75AQ8NAA5 344 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 PLA2G12AQ9BZM1 189 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 PIGMQ9H3S5 423 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 FANCFQ9NPI8 374 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 GRHPRQ9UBQ7 328 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 PRSS50Q9UI38 385 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 NBASA2RRP1 2371 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 EI24O14681 340 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 MITFO75030 526 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC43A1O75387 559 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 CD14P08571 375 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 RNF224P0DH78 156 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 IGFBP5P24593 272 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 OR3A2P47893 321 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 LGALS3BPQ08380 585 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 COX10Q12887 443 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 RPL13AP3Q6NVV1 102 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 XKRXQ6PP77 449 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF808Q8N4W9 903 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 TEX47Q8TBZ9 253 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 TSPAN32Q96QS1 320 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 OR2M2Q96R28 347 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 TSSK6Q9BXA6 273 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 GABARAPL1Q9H0R8 117 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 PLSCR4Q9NRQ2 329 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 UPB1Q9UBR1 384 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF346Q9UL40 294 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 POFUT2Q9Y2G5 429 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 IER3IP1Q9Y5U9 82 aa12.44□□□□□ -0.42
VIPAS39-208ENST00000556412 RELNP78509 3460 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 KIAA1549Q9HCM3 1950 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 CGAP01215 116 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 CD8BP10966 210 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 NOS3P29474 1203 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 ACVR1BP36896 505 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 SLC25A35Q3KQZ1 300 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 TSPO2Q5TGU0 170 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 CD300LDQ6UXZ3 194 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 WDFY1Q8IWB7 410 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 OR8D4Q8NGM9 314 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 LILRB4Q8NHJ6 448 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 SSC4DQ8WTU2 575 aa12.43□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF570Q96NI8 536 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms