RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TIFABQ6ZNK6 161 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 TUBA1AQ71U36 451 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 ADGRG3Q86Y34 549 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 IL17RDQ8NFM7 739 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 CDC26Q8NHZ8 85 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 METTL6Q8TCB7 284 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 TMEM234Q8WY98 164 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 POP5Q969H6 163 aaKnown RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 TMEM45BQ96B21 275 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 DNAJA3Q96EY1 480 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 NEIL1Q96FI4 390 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 OTUB1Q96FW1 271 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 AURKBQ96GD4 344 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 PKNOX2Q96KN3 472 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 MS4A4EQ96PG1 132 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 STACQ99469 402 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 THUMPD3Q9BV44 507 aaKnown RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 MECRQ9BV79 373 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 MRPL37Q9BZE1 423 aaKnown RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 LAT2Q9GZY6 243 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 PIGUQ9H490 435 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 BEX1Q9HBH7 125 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 MED4Q9NPJ6 270 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 DUSP22Q9NRW4 184 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 MID2Q9UJV3 735 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 TRAPPC4Q9Y296 219 aa5.83□□□□□ -1.48
ATXN3-236ENST00000556220 SPIN1Q9Y657 262 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-236ENST00000556220 DYNC2H1Q8NCM8 4307 aaKnown RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 PPIAL4EA0A075B759 164 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 PPIAL4CA0A0B4J2A2 164 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 PPIAL4DF5H284 164 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 NPIPB9F8W1W9 429 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 G3V2L1 256 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ANKRD28O15084 1053 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 EIF1BO60739 113 aaKnown RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 KRT33AO76009 404 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 NCR1O76036 304 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 IGHV2-5P01817 119 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 GSTA2P09210 222 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 PPIAL4FP0DN26 164 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 UBL4AP11441 157 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 TAC1P20366 129 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 NR4A1P22736 598 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 MDH1P40925 334 aaKnown RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ALDH3B1P43353 468 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 HTR6P50406 440 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 DBPQ10586 325 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 SNTB2Q13425 540 aaKnown RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 BEAN1Q3B7T3 259 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 OTUD3Q5T2D3 398 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 CDC73Q6P1J9 531 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 SPATC1Q76KD6 591 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 AAED1Q7RTV5 226 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 SZRD1Q7Z422 152 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 MAVSQ7Z434 540 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 MYPOPQ86VE0 399 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 TMCO5AQ8N6Q1 288 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF614Q8N883 585 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ZIC4Q8N9L1 334 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 OR4F5Q8NH21 305 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 FAM76AQ8TAV0 307 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 JADE3Q92613 823 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 CDS1Q92903 461 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 CIDECQ96AQ7 238 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 NAA11Q9BSU3 229 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 CCDC106Q9BWC9 280 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ROPN1BQ9BZX4 212 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ROPN1Q9HAT0 212 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-236ENST00000556220 NOX3Q9HBY0 568 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 SLCO1B3Q9NPD5 702 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 CTPS2Q9NRF8 586 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 TMEM216Q9P0N5 145 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 TMEM181Q9P2C4 612 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 CHRNA9Q9UGM1 479 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF180Q9UJW8 692 aa5.82□□□□□ -1.48
ATXN3-236ENST00000556220 HMGB1P1B2RPK0 211 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 ZNF587BE7ETH6 402 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 PDPK1O15530 556 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 ITM2AO43736 263 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 SKAP2O75563 359 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 PRB2P02812 416 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 HMGN2P05204 90 aaKnown RBP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 MYZAPP0CAP1 466 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 SELEP16581 610 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 HMOX2P30519 316 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 LSP1P33241 339 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 GLRXP35754 106 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 ARR3P36575 388 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 MTNR1AP48039 350 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 ATP4BP51164 291 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 KRTAP10-3P60369 221 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 SLC35A1P78382 337 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 SF3A3Q12874 501 aaKnown RBP eCLIP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 NAB1Q13506 487 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 HLXQ14774 488 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 LASP1Q14847 261 aaKnown RBP5.81□□□□□ -1.48
ATXN3-236ENST00000556220 PCLAFQ15004 111 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 TAF9Q16594 264 aa5.81□□□□□ -1.48
ATXN3-236ENST00000556220 MMEL1Q495T6 779 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms