RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KRTAP1-1Q07627 177 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 RIPK1Q13546 671 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 RAB35Q15286 201 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 MAPK11Q15759 364 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 SNCBQ16143 134 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 GSTA3Q16772 222 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 HIKESHIQ53FT3 197 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 ZNF311Q5JNZ3 666 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 C1orf140Q5VVS0 124 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 PRAMEF8Q5VWM4 474 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 PRAMEF7Q5VXH5 474 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 FDX2Q6P4F2 183 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 LRFN4Q6PJG9 635 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 CLEC2AQ6UVW9 174 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 B3GLCTQ6Y288 498 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 SERPINA11Q86U17 422 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 MIER2Q8N344 545 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 WDR31Q8NA23 367 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 MAL2Q969L2 176 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 SLC25A36Q96CQ1 311 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 TMEM19Q96HH6 336 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 ZNF385AQ96PM9 386 aaKnown RBP5.86□□□□□ -1.47
PSEN1-216ENST00000556066 RAB3IPQ96QF0 476 aaPredicted RBP5.86□□□□□ -1.47
PSEN1-216ENST00000556066 BTBD10Q9BSF8 475 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 CADM1Q9BY67 442 aaKnown RBP5.86□□□□□ -1.47
PSEN1-216ENST00000556066 ARMC7Q9H6L4 198 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 FKRPQ9H9S5 495 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 SLC17A5Q9NRA2 495 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 SDR39U1Q9NRG7 319 aaPredicted RBP5.86□□□□□ -1.47
PSEN1-216ENST00000556066 MOKQ9UQ07 419 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 AMDHD2Q9Y303 409 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 MALRD1Q5VYJ5 2156 aa5.86□□□□□ -1.47
PSEN1-216ENST00000556066 DSPPQ9NZW4 1301 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 IGHV4-30-2A0A087WSY4 118 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 A0A0G2JPF8 293 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 AQP7P3A6NL99 342 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 B2RBV5 119 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 HNRNPCL2B2RXH8 293 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 HNRNPCL3B7ZW38 293 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 C5orf58C9J3I9 102 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ZNF587BE7ETH6 402 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ATP6V1G2-DDX39BF2Z307 99 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 PDLIM1O00151 329 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 CLIC1O00299 241 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 GSC2O15499 205 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 GPRIN2O60269 458 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 HNRNPCL1O60812 293 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 CCDC22O60826 627 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 AHSA1O95433 338 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 LGI1O95970 557 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 WNT11O96014 354 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ZCCHC18P0CG32 403 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 HNRNPCL4P0DMR1 293 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 CALB2P22676 271 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 GTF2E2P29084 291 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 RAD52P43351 418 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 RPS5P46782 204 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 SELENOPP49908 381 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 RASSF2P50749 326 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 UBE2NP61088 152 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 STX1BP61266 288 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 IL1RL1Q01638 556 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 CHRNB3Q05901 458 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 LGALS3BPQ08380 585 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 RGNQ15493 299 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ZSWIM7Q19AV6 140 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 RNF220Q5VTB9 566 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 FAM91A1Q658Y4 838 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 C11orf71Q6IPW1 123 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ZNF544Q6NX49 715 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 NIPAL3Q6P499 406 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 SLC2A7Q6PXP3 512 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 EPGNQ6UW88 154 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 MSANTD1Q6ZTZ1 278 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 REC114Q7Z4M0 266 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ABHD12BQ7Z5M8 362 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 KDM8Q8N371 416 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 C17orf78Q8N4C9 275 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ZNF525Q8N782 197 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ZIC4Q8N9L1 334 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 POMGNT2Q8NAT1 580 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 C1orf162Q8NEQ5 155 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 TRIM63Q969Q1 353 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 TMEM45BQ96B21 275 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 FBXO17Q96EF6 278 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 MAELQ96JY0 434 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 FANCD2OSQ96PS1 177 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 ALKBH3Q96Q83 286 aaPredicted RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 KCNS3Q9BQ31 491 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 SF3B5Q9BWJ5 86 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 SPATA9Q9BWV2 254 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 AMBRA1Q9C0C7 1298 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 TMEM45AQ9NWC5 275 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 THUMPD1Q9NXG2 353 aaKnown RBP5.85□□□□□ -1.47
PSEN1-216ENST00000556066 TAS2R1Q9NYW7 299 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 RPS6KB2Q9UBS0 482 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 IFT52Q9Y366 437 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 CHST2Q9Y4C5 530 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 PCDHB14Q9Y5E9 798 aa5.85□□□□□ -1.47
PSEN1-216ENST00000556066 SNX5Q9Y5X3 404 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms