RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 CRLS1Q9UJA2 301 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 DNAJC12Q9UKB3 198 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 RARRES3Q9UL19 164 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 MGAT4AQ9UM21 535 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 RPH3ALQ9UNE2 315 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 FBXO7Q9Y3I1 522 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 TNFRSF18Q9Y5U5 241 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 CPQQ9Y646 472 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 CAMSAP2Q08AD1 1489 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 IFT140Q96RY7 1462 aa2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 BAZ1AQ9NRL2 1556 aaPredicted RBP2.49□□□□□ -2.01
MTHFD1-212ENST00000555858 CLUHO75153 1309 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 SALL1Q9NSC2 1324 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TRGV8A0A0C4DH27 118 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TRBV7-9A0A0J9YWB2 115 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 A0A1W2PNV4 684 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 VPS37CA5D8V6 355 aaPredicted RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ARHGEF35A5YM69 484 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 METTL21EPA6NDL7 271 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 A6NIZ1 184 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 FAM74A7A6NL05 159 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ERI2A8K979 691 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TMEM238C9JI98 176 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 NPIPA7E9PJI5 369 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 C11orf98E9PRG8 122 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PDHXO00330 501 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 BTN3A3O00478 584 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 NTN3O00634 580 aaPredicted RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TXNDC9O14530 226 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ACOX3O15254 700 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 SLC31A2O15432 143 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PPIHO43447 177 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 DPM1O60762 260 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RAMP1O60894 148 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 SHOX2O60902 331 aaPredicted RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 CTNSO60931 367 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ZMPSTE24O75844 475 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 B3GAT3O94766 335 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 IGF1P05019 195 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 FAM228BP0C875 321 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ZSCAN5DPP0CG00 497 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TRIM49P0CI25 452 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TRIM49CP0CI26 452 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 NPIPA8P0DM63 369 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 DBTP11182 482 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 BCKDHAP12694 445 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TPSB2P20231 275 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RAB3AP20336 220 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ZNF10P21506 573 aaPredicted RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 WARSP23381 471 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 CMA1P23946 247 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 S100PP25815 95 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 G0S2P27469 103 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 IL12BP29460 328 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 MAS1LP35410 378 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 GRIA1P42261 906 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 MAGEA5P43359 124 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 NAMPTP43490 491 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 YAP1P46937 504 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 CAPZBP47756 277 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 SRP9P49458 86 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 BCAP31P51572 246 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 C21orf59P57076 290 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 CXCR4P61073 352 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RAB11AP62491 216 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RPS15P62841 145 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 SLAMF1Q13291 335 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 TPSAB1Q15661 275 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RAB11BQ15907 218 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 GUK1Q16774 197 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 C5orf64Q2M2E5 130 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 FAM74A3Q4VXF1 159 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ACTBL2Q562R1 376 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 LINC00242Q5T6M2 205 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PRAMEF5Q5TYX0 476 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 GPR107Q5VW38 600 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PRAMEF6Q5VXH4 476 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RAET1LQ5VY80 246 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 WSCD1Q658N2 575 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 OR5M10Q6IEU7 315 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 APOOLQ6UXV4 268 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 Q6ZPB1 254 aaPredicted RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 USP43Q70EL4 1123 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PGAP1Q75T13 922 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 SLC35D2Q76EJ3 337 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PID1Q7Z2X4 250 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 C16orf62Q7Z3J2 963 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 HSD11B1LQ7Z5J1 315 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 CEACAM19Q7Z692 300 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 VRK2Q86Y07 508 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ECHDC2Q86YB7 292 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 RBM45Q8IUH3 476 aaKnown RBP2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 LRRC75A-AS1Q8N1F1 130 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 CLDN19Q8N6F1 224 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 PQLC3Q8N755 202 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 ZNF614Q8N883 585 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 AQP11Q8NBQ7 271 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 NECAP1Q8NC96 275 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 BEST4Q8NFU0 473 aa2.48□□□□□ -2.01
MTHFD1-212ENST00000555858 OR2L5Q8NG80 312 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms