RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 DDOSTP39656 456 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 MESDQ14696 234 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 TPD52L1Q16890 204 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-216ENST00000555550 TATDN3Q17R31 274 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 CARD16Q5EG05 197 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 C1orf94Q6P1W5 598 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 BRD3OSQ6XYD6 125 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 GET4Q7L5D6 327 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-216ENST00000555550 TRIM69Q86WT6 500 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 PLA2G4DQ86XP0 818 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 ZNF547Q8IVP9 402 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 ZNF679Q8IYX0 411 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 FADS6Q8N9I5 356 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 IPMKQ8NFU5 416 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 RGP1Q92546 391 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-216ENST00000555550 UFD1Q92890 307 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 FOXC2Q99958 501 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 OMDQ99983 421 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 CAPS2Q9BXY5 557 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 NHEJ1Q9H9Q4 299 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-216ENST00000555550 GIN1Q9NXP7 522 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 SPATA7Q9P0W8 599 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 RFNGQ9Y644 331 aa1.83□□□□□ -2.12
SCFD1-216ENST00000555550 IGKV3D-11A0A0A0MRZ8 115 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 CCER2I3L3R5 266 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 POLR2DO15514 142 aaKnown RBP1.82□□□□□ -2.12
SCFD1-216ENST00000555550 PNMTP11086 282 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 CYB561P49447 251 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 VGLL4Q14135 290 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 INAQ16352 499 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 USH1GQ495M9 461 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 NCR3LG1Q68D85 454 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 CNIH2Q6PI25 160 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 CCDC80Q76M96 950 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 RIMKLAQ8IXN7 391 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 ZNF619Q8N2I2 560 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 ARL10Q8N8L6 244 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 GEMIN6Q8WXD5 167 aaKnown RBP1.82□□□□□ -2.12
SCFD1-216ENST00000555550 CTNNBL1Q8WYA6 563 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-216ENST00000555550 RBMXL1Q96E39 390 aaKnown RBP1.82□□□□□ -2.12
SCFD1-216ENST00000555550 PELI1Q96FA3 418 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 CLCC1Q96S66 551 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 ZNRD1Q9P1U0 126 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 XCL2Q9UBD3 114 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 PCSK1NQ9UHG2 260 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 RPH3ALQ9UNE2 315 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 F11RQ9Y624 299 aaKnown RBP1.82□□□□□ -2.12
SCFD1-216ENST00000555550 TMEM14AQ9Y6G1 99 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 TUBGCP6Q96RT7 1819 aa1.82□□□□□ -2.12
SCFD1-216ENST00000555550 IGLV3-12A0A075B6K2 115 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 BTN3A3O00478 584 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 CBR3O75828 277 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 SLC25A14O95258 325 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-216ENST00000555550 AK1P00568 194 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 SMIM10L1P0DMW3 83 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 CASP4P49662 377 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 ERVK-25P63136 954 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 PLD1Q13393 1074 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 DUSP7Q16829 419 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 VAX1Q5SQQ9 334 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 ZNF684Q5T5D7 378 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 HES5Q5TA89 166 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 GRAMD2AQ8IUY3 354 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 ZADH2Q8N4Q0 377 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 MREGQ8N565 214 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 SYT14Q8NB59 555 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 VN1R2Q8NFZ6 395 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 OR4D5Q8NGN0 318 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 OR10G4Q8NGN3 311 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 OR10T2Q8NGX3 314 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 CCDC110Q8TBZ0 833 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 OSTF1Q92882 214 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 SMIM10Q96HG1 83 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 RNF157Q96PX1 679 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 SECISBP2Q96T21 854 aaKnown RBP1.81□□□□□ -2.12
SCFD1-216ENST00000555550 GABARAPL3Q9BY60 117 aa1.81□□□□□ -2.12
SCFD1-216ENST00000555550 RPP21Q9H633 154 aaKnown RBP1.81□□□□□ -2.12
SCFD1-216ENST00000555550 MRPL47Q9HD33 250 aaKnown RBP1.81□□□□□ -2.12
SCFD1-216ENST00000555550 DHX57Q6P158 1386 aaKnown RBP1.81□□□□□ -2.12
SCFD1-216ENST00000555550 OTOGLQ3ZCN5 2332 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 A0A1B0GVX0 72 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 MED7O43513 233 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 LINC00869P0C866 280 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 HSMCR30P0CW71 290 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 SLC7A9P82251 487 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 SYCNQ0VAF6 134 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 ERCC8Q13216 396 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 AQP6Q13520 282 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 DMRTC1Q5HYR2 192 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 C10orf120Q5SQS8 335 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 NCCRP1Q6ZVX7 275 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-216ENST00000555550 UTS2BQ765I0 119 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 STRADAQ7RTN6 431 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 BIVMQ86UB2 503 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 ZNF573Q86YE8 665 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 C15orf56Q8N910 161 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 OR52H1Q8NGJ2 320 aa1.8□□□□□ -2.12
SCFD1-216ENST00000555550 SDR42E1Q8WUS8 393 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms