RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ALG12Q9BV10 488 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 MRPL13Q9BYD1 178 aaKnown RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 SMYD3Q9H7B4 428 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 COQ10BQ9H8M1 238 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 POLE4Q9NR33 117 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 KCNIP1Q9NZI2 227 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 AIPL1Q9NZN9 384 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ACTR3BQ9P1U1 418 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 COPS3Q9UNS2 423 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 AK6Q9Y3D8 172 aaKnown RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 F11RQ9Y624 299 aaKnown RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 GPRASP1Q5JY77 1395 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 SCN1AP35498 2009 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 IGHV3-66A0A0C4DH42 116 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TCRBV9S1A1TA0A576 114 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 PRSS37A4D1T9 235 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 METTL21EPA6NDL7 271 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 ZNF878C9JN71 531 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 F8WDY8 70 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 FOXE1O00358 373 aaPredicted RBP0.89□□□□□ -2.27
SRP54-207ENST00000555535 MAPK13O15264 365 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 CTAGE5O15320 804 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 SLC31A2O15432 143 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 POLR2DO15514 142 aaKnown RBP0.89□□□□□ -2.27
SRP54-207ENST00000555535 ZNF207O43670 478 aaKnown RBP0.89□□□□□ -2.27
SRP54-207ENST00000555535 CXCL13O43927 109 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 DEDDO75618 318 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 CCNKO75909 580 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 DIRAS1O95057 198 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 LGALS2P05162 132 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 UGT2B4P06133 528 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 NCK1P16333 377 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TPSB2P20231 275 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TBXA2RP21731 343 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 CCND2P30279 289 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 CA8P35219 290 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 P2RY1P47900 373 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 HSD17B7P56937 341 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 ESRRGP62508 458 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 ACVR1Q04771 509 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 PDZK1IP1Q13113 114 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 SCGB2A2Q13296 93 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OXA1LQ15070 435 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TPSAB1Q15661 275 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 INAQ16352 499 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 HSP90AA5PQ58FG0 334 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OR52E8Q6IFG1 317 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 AFTPHQ6ULP2 937 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 CCDC80Q76M96 950 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 ZNF573Q86YE8 665 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OR2L13Q8N349 312 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 DHRSXQ8N5I4 330 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 MIR7-3HGQ8N6C7 128 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 NECAP1Q8NC96 275 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 IPMKQ8NFU5 416 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OR52H1Q8NGJ2 320 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OR10T2Q8NGX3 314 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OSTF1Q92882 214 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 PELI1Q96FA3 418 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 MED8Q96G25 268 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 SH3YL1Q96HL8 342 aaPredicted RBP0.89□□□□□ -2.27
SRP54-207ENST00000555535 SEC22AQ96IW7 307 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 AMDHD1Q96NU7 426 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 RNF2Q99496 336 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 SLC35A5Q9BS91 424 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 CHAC1Q9BUX1 264 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TEKT3Q9BXF9 490 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 REEP4Q9H6H4 257 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 MCCC2Q9HCC0 563 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TMOD2Q9NZR1 351 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 ZNRD1Q9P1U0 126 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 AURKCQ9UQB9 309 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 OR10H1Q9Y4A9 318 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 TICRRQ7Z2Z1 1910 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 ZSWIM8A7E2V4 1837 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 SF3B1O75533 1304 aaKnown RBP eCLIP0.89□□□□□ -2.27
SRP54-207ENST00000555535 NFASCO94856 1347 aa0.89□□□□□ -2.27
SRP54-207ENST00000555535 A0A1B0GW55 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 A8MXQ7 604 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 PRRG1O14668 218 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 TOM1O60784 492 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 SMPD2O60906 423 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 BCAS1O75363 584 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 H2BFMP0C1H6 154 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4L2P0CJ85 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4L3P0CJ86 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4L5P0CJ88 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4L6P0CJ89 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DUX4L7P0CJ90 424 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 PRPS2P11908 318 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 HPGDP15428 266 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 NPR2P20594 1047 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 NT5EP21589 574 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 DRD5P21918 477 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 MMP11P24347 488 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 GNA11P29992 359 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 RFC4P35249 363 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 RGS4P49798 205 aa0.88□□□□□ -2.27
SRP54-207ENST00000555535 IRX3P78415 501 aaPredicted RBP0.88□□□□□ -2.27
SRP54-207ENST00000555535 ASPHQ12797 758 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms