RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 A0A1W2PNV4 684 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 AQP7P3A6NL99 342 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 FAM90A27PA6NNH2 459 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 KDM4EB2RXH2 506 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-218ENST00000555213 EEF1E1-BLOC1S5C9J1V9 151 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 LRRN3E7EW58 273 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 GPR171O14626 319 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 EEF1E1O43324 174 aaKnown RBP9.72□□□□□ -0.85
SHMT2-218ENST00000555213 CYTIPO60759 359 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 SS18L1O75177 396 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-218ENST00000555213 TOXO94900 526 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 VAMP5O95183 116 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 SOX14O95416 240 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 CLDN14O95500 239 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 IGF2P01344 180 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 HIST1H2ABP04908 130 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 IMPDH2P12268 514 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 IFI30P13284 250 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 GSTM3P21266 225 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 IFNGR2P38484 337 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 CHN2P52757 468 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 SIRPAP78324 504 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 RASGEF1BQ0VAM2 473 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 C6orf141Q5SZD1 244 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 C12orf73Q69YU5 71 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 PLXDC2Q6UX71 529 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 HIST3H2AQ7L7L0 130 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 MAMDC2Q7Z304 686 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-218ENST00000555213 SLC46A3Q7Z3Q1 461 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 LURAP1LQ8IV03 231 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 ENTHD1Q8IYW4 607 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 LRRC17Q8N6Y2 441 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 SCAIQ8N9R8 606 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 NAXEQ8NCW5 288 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 OR6K3Q8NGY3 331 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 ITLN2Q8WWU7 325 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-218ENST00000555213 HIST1H2ACQ93077 130 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 TNFRSF13CQ96RJ3 184 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 PTDSS2Q9BVG9 487 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF556Q9HAH1 456 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 RASD1Q9Y272 281 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 SIGLEC7Q9Y286 467 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 B3GALT5Q9Y2C3 310 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 ORC6Q9Y5N6 252 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 GMPPBQ9Y5P6 360 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 HSPE1-MOB4S4R3N1 261 aa9.72□□□□□ -0.85
SHMT2-218ENST00000555213 DOPEY1Q5JWR5 2465 aa9.71□□□□□ -0.85
SHMT2-218ENST00000555213 WIPF3A6NGB9 483 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 UNC119BA6NIH7 251 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ENO4A6NNW6 628 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 FTCDNL1E5RQL4 147 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 M0R082 166 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 AKR7A3O95154 331 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 OR6A2O95222 327 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 YES1P07947 543 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 TSPAN19P0C672 248 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 CDH2P19022 906 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 GRPRP30550 384 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 AGTR1P30556 359 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 RPS6KA3P51812 740 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 PMS2P3Q13401 168 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 GINS1Q14691 196 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 MAD2L1BPQ15013 274 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF362Q5T0B9 420 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 TMEM225Q6GV28 225 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 H1FNTQ75WM6 255 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 NANOGNBQ7Z5D8 188 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 GPAT4Q86UL3 456 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 CCDC103Q8IW40 242 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 CDK20Q8IZL9 346 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 IQCF1Q8N6M8 205 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 CLDN22Q8N7P3 220 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ADPRHL1Q8NDY3 354 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 OR4Q3Q8NH05 313 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 LILRB4Q8NHJ6 448 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF417Q8TAU3 575 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 TAAR8Q969N4 342 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 SGTBQ96EQ0 304 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 MOGAT1Q96PD6 335 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF587Q96SQ5 575 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 SF3B5Q9BWJ5 86 aaKnown RBP9.71□□□□□ -0.86
SHMT2-218ENST00000555213 NDEL1Q9GZM8 345 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF696Q9H7X3 374 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 FKRPQ9H9S5 495 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 BCO1Q9HAY6 547 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 SLC25A19Q9HC21 320 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 MCCC2Q9HCC0 563 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 CHST11Q9NPF2 352 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 FANCFQ9NPI8 374 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 KCNJ16Q9NPI9 418 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 NANSQ9NR45 359 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF229Q9UJW7 825 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 CLEC4AQ9UMR7 237 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 PROCRQ9UNN8 238 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 TMEM5Q9Y2B1 443 aa9.71□□□□□ -0.86
SHMT2-218ENST00000555213 IGKV3D-15A0A087WSY6 115 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 MAGEA13PA6NCF6 341 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms